Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BK049_RS03010 Genome accession   NZ_CP017786
Coordinates   602489..603439 (-) Length   316 a.a.
NCBI ID   WP_008359069.1    Uniprot ID   A0AAC9IET1
Organism   Bacillus xiamenensis strain VV3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 597489..608439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BK049_RS02980 (BK049_02980) - 597808..598170 (+) 363 WP_008355122.1 hypothetical protein -
  BK049_RS02985 (BK049_02985) - 598259..598690 (+) 432 WP_232532167.1 enoyl-CoA hydratase -
  BK049_RS02990 (BK049_02990) - 598731..599690 (-) 960 WP_008355118.1 LCP family protein -
  BK049_RS02995 (BK049_02995) - 599830..600774 (-) 945 WP_071167811.1 siderophore ABC transporter substrate-binding protein -
  BK049_RS03000 (BK049_03000) - 600797..601555 (-) 759 WP_008359073.1 ATP-binding cassette domain-containing protein -
  BK049_RS03005 (BK049_03005) - 601546..602496 (-) 951 WP_008359071.1 iron chelate uptake ABC transporter family permease subunit -
  BK049_RS03010 (BK049_03010) ceuB 602489..603439 (-) 951 WP_008359069.1 ABC transporter permease Machinery gene
  BK049_RS03015 (BK049_03015) - 603598..603876 (-) 279 WP_008359067.1 barstar family protein -
  BK049_RS03020 (BK049_03020) - 603940..605109 (-) 1170 WP_071167812.1 MFS transporter -
  BK049_RS03025 (BK049_03025) - 605255..606694 (+) 1440 WP_071167813.1 PLP-dependent aminotransferase family protein -
  BK049_RS03030 (BK049_03030) - 606726..607208 (-) 483 WP_071167814.1 hypothetical protein -
  BK049_RS18695 - 607502..607777 (-) 276 Protein_616 cupin domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34905.29 Da        Isoelectric Point: 9.7475

>NTDB_id=202903 BK049_RS03010 WP_008359069.1 602489..603439(-) (ceuB) [Bacillus xiamenensis strain VV3]
MKLYQLSLLFVCLACASLFVGVQDLSILQLFHLTDEQVQTLLSSRIPRLMSIVLAGMSLSICGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIISSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYVYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=202903 BK049_RS03010 WP_008359069.1 602489..603439(-) (ceuB) [Bacillus xiamenensis strain VV3]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCACTGTTTGTCGGTGTACAGGATCTGTCTAT
TTTACAGTTGTTTCATCTAACAGATGAACAAGTGCAAACCTTATTATCAAGCCGCATCCCGCGGTTGATGAGTATTGTGC
TTGCTGGCATGAGTCTGAGCATATGCGGCTTTATTATGCAAAGCATGACGAGAAATAAATTTGTATCTCCAACCACTGCA
GGAACAATGGATTGGGCCAAGCTTGGGATCTTGGTCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTAATGAAAATGGC
TATCGCTTTTCTATTTACTTTAGCCGGTAATCTATTATTCTTAAAAATTTTGCGCCATATTAAGGTGAACGATACGATCT
ATGTACCGTTAGTCGGCTTAATGTTTGGCGGGATTATTAGTTCTATCTCCACGTTTATCGCCTATAAATATGATCTGATT
CAAAACGTATCAGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAGCTGCTCTATGTGAGTGTTCC
GCTATTGATCATTGCGTATGTATATGCGGACCGTTTTACAGTGGCTGGTATGGGCGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCGATGATTACTTCTGTCACGATTTTAACTGTGGGTATG
CTGCCATTCCTCGGCTTAATCATTCCTAATATTGTATCGATCTACCGAGGGGATCATCTGAAAAAGAGTCTGCCGCATAC
GGCTTTACTAGGTGCCATTTTTGTGCTCATCTGTGACGTACTCGGACGGGTGATCATTTATCCATATGAAATTTCTGTCG
GGCTCATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.667

94.937

0.5

Multiple sequence alignment