Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   CJZ70_RS04485 Genome accession   NZ_CP022890
Coordinates   873041..873904 (+) Length   287 a.a.
NCBI ID   WP_095010814.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_NT_02     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 868041..878904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ70_RS04460 (CJZ70_04460) pncA 868506..869057 (+) 552 WP_095010585.1 isochorismatase family cysteine hydrolase -
  CJZ70_RS04465 (CJZ70_04465) pncB 869073..870545 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  CJZ70_RS04470 (CJZ70_04470) pdeH 870682..871911 (+) 1230 WP_095010586.1 cyclic di-GMP phosphodiesterase -
  CJZ70_RS04475 (CJZ70_04475) - 871887..872255 (-) 369 WP_017695529.1 hypothetical protein -
  CJZ70_RS21085 - 872370..872495 (-) 126 WP_120028613.1 hypothetical protein -
  CJZ70_RS04480 (CJZ70_04480) degQ 872717..872857 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  CJZ70_RS04485 (CJZ70_04485) comQ 873041..873904 (+) 864 WP_095010814.1 polyprenyl synthetase family protein Regulator
  CJZ70_RS04490 (CJZ70_04490) comX 873906..874127 (+) 222 WP_014480704.1 competence pheromone ComX -
  CJZ70_RS04495 (CJZ70_04495) comP 874143..876455 (+) 2313 WP_014480703.1 sensor histidine kinase Regulator
  CJZ70_RS04500 (CJZ70_04500) comA 876536..877180 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  CJZ70_RS04505 (CJZ70_04505) yuxO 877199..877579 (+) 381 WP_069837723.1 hotdog fold thioesterase -
  CJZ70_RS04510 (CJZ70_04510) mnhG 877618..877992 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  CJZ70_RS04515 (CJZ70_04515) mrpF 877976..878260 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  CJZ70_RS04520 (CJZ70_04520) mrpE 878260..878736 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 287 a.a.        Molecular weight: 32833.37 Da        Isoelectric Point: 5.0723

>NTDB_id=202790 CJZ70_RS04485 WP_095010814.1 873041..873904(+) (comQ) [Bacillus subtilis strain DKU_NT_02]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=202790 CJZ70_RS04485 WP_095010814.1 873041..873904(+) (comQ) [Bacillus subtilis strain DKU_NT_02]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains


Predicted by InterProScan.

(47-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439