Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   BKP58_RS14350 Genome accession   NZ_CP017763
Coordinates   2671586..2671705 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain 29R7-12     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 2666586..2676705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKP58_RS14330 (BKP58_14325) pbpG 2666956..2669031 (-) 2076 WP_014481227.1 transglycosylase domain-containing protein -
  BKP58_RS14335 (BKP58_14330) speE 2669233..2670063 (+) 831 WP_003227543.1 spermidine synthase -
  BKP58_RS14340 (BKP58_14335) speB 2670124..2670996 (+) 873 WP_003227545.1 agmatinase -
  BKP58_RS14345 (BKP58_14340) - 2671061..2671488 (-) 428 Protein_2762 YbaK/EbsC family protein -
  BKP58_RS14350 (BKP58_14345) phrF 2671586..2671705 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  BKP58_RS14355 (BKP58_14350) rapF 2671689..2672834 (-) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  BKP58_RS23575 (BKP58_14355) - 2672837..2673067 (+) 231 Protein_2765 hypothetical protein -
  BKP58_RS14365 (BKP58_14360) ywhK 2673064..2674419 (+) 1356 WP_014481224.1 YncE family protein -
  BKP58_RS14370 (BKP58_14365) ywhL 2674458..2675834 (+) 1377 WP_014481223.1 YncE family protein -
  BKP58_RS14375 (BKP58_14370) albG 2675840..2676541 (-) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=202676 BKP58_RS14350 WP_009968329.1 2671586..2671705(-) (phrF) [Bacillus subtilis strain 29R7-12]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=202676 BKP58_RS14350 WP_009968329.1 2671586..2671705(-) (phrF) [Bacillus subtilis strain 29R7-12]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment