Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BI197_RS09605 Genome accession   NZ_CP017747
Coordinates   2042619..2042810 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain SYBC H47     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2037619..2047810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BI197_RS09580 - 2037975..2038961 (-) 987 WP_029325950.1 ABC transporter ATP-binding protein -
  BI197_RS09585 - 2039135..2039920 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  BI197_RS09590 fabF 2040004..2041242 (-) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  BI197_RS09595 - 2041265..2042203 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BI197_RS09600 - 2042371..2042589 (+) 219 WP_003155059.1 hypothetical protein -
  BI197_RS09605 comZ 2042619..2042810 (-) 192 WP_003155061.1 ComZ family protein Regulator
  BI197_RS09610 med 2042823..2043776 (-) 954 WP_070081621.1 BMP family ABC transporter substrate-binding protein Regulator
  BI197_RS09615 - 2043866..2044432 (-) 567 WP_071391998.1 hypothetical protein -
  BI197_RS09620 - 2044515..2045249 (-) 735 WP_070081619.1 hypothetical protein -
  BI197_RS09625 - 2045510..2045695 (+) 186 WP_032874447.1 YjzD family protein -
  BI197_RS09630 - 2045732..2045911 (-) 180 WP_003155070.1 YjzC family protein -
  BI197_RS09635 argF 2045987..2046958 (-) 972 WP_071391999.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=202452 BI197_RS09605 WP_003155061.1 2042619..2042810(-) (comZ) [Bacillus velezensis strain SYBC H47]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=202452 BI197_RS09605 WP_003155061.1 2042619..2042810(-) (comZ) [Bacillus velezensis strain SYBC H47]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCTGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment