Detailed information NTG0020204

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: SPG_1495
• Genome accession: CP001015
• Coordinates: 1441598..1442830 (-)
• Length: 410 a.a.
• NCBI ID: ACF55845.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae G54
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1436598..1447830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPG_1489	-	1436785..1437753 (+)	969	ACF56155.1	Pyridine nucleotide-disulphide oxidoreductase family protein	-
SPG_1490	-	1437787..1438698 (-)	912	ACF56637.1	conserved hypothetical protein	-
SPG_1491	-	1438695..1439672 (-)	978	ACF56200.1	conserved hypothetical protein	-
SPG_1492	-	1439669..1440559 (-)	891	ACF56839.1	hypothetical protein	-
SPG_1493	-	1440611..1440991 (-)	381	ACF55160.1	endoribonuclease L-PSP, putative	-
SPG_1494	ysxC	1441002..1441589 (-)	588	ACF55361.1	ribosome biogenesis GTP-binding protein YsxC	-
SPG_1495	clpX	1441598..1442830 (-)	1233	ACF55845.1	ATP-dependent Clp protease, ATP-binding subunit ClpX	Regulator
SPG_1496	-	1442862..1443032 (-)	171	ACF56578.1	conserved hypothetical protein	-
SPG_1497	folA	1443032..1443538 (-)	507	ACF54938.1	dihydrofolate reductase	-
SPG_1498	-	1443668..1444186 (-)	519	ACF56222.1	Ferritin-like domain	-
SPG_1499	lytC	1444682..1446154 (-)	1473	ACF55821.1	endo-beta-N-acetylglucosaminidase	-
SPG_1500	tpiA	1446225..1446983 (-)	759	ACF56186.1	triosephosphate isomerase	-
SPG_1501	-	1447081..1447758 (-)	678	ACF56644.1	conserved hypothetical protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45816.38 Da
• Isoelectric Point: 4.4550

>NTDB_id=20204 SPG_1495 ACF55845.1 1441598..1442830(-) (clpX) [Streptococcus pneumoniae G54]
MSTNRKNDMMVYCSFCGKNQEEVQKIIAGNNAFICNECVELAQEIIREELVEEVLADLSEVPKPIELLHILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQVADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRMGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKETVD
GTDKPILETA

Nucleotide

• Length: 1233 bp

>NTDB_id=20204 SPG_1495 ACF55845.1 1441598..1442830(-) (clpX) [Streptococcus pneumoniae G54]
ATGTCTACAAATAGAAAAAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAACCAAGAAGAAGTACAAAAAATAAT
TGCTGGCAACAATGCTTTTATTTGTAATGAATGCGTGGAGTTAGCTCAGGAAATCATTCGAGAAGAATTGGTTGAGGAAG
TCTTGGCAGACTTGTCTGAGGTGCCAAAACCAATTGAACTCCTCCATATCTTGAACCACTATGTAATTGGTCAAGATCGT
GCCAAGCGTGCCTTGGCAGTGGCGGTTTATAACCACTACAAACGCATCAATTTCCACGATACACGCGAAGAGTCAGAAGA
TGTGGATTTGCAGAAGTCAAACATTTTGATGATTGGCCCAACTGGTTCAGGGAAAACTTTCCTTGCCCAGACCTTGGCTA
AGAGCTTGAATGTACCTTTTGCTATTGCGGATGCGACAGCTCTGACGGAGGCTGGTTATGTGGGTGAGGATGTGGAAAAT
ATCCTCCTCAAACTCTTGCAGGTTGCTGACTTTAACATCGAACGTGCAGAGCGTGGCATTATCTATGTGGATGAAATTGA
CAAGATTGCCAAGAAGAGTGAGAATGTGTCTATCACACGTGATGTTTCTGGTGAAGGGGTGCAACAAGCCCTTCTCAAGA
TTATCGAGGGAACTGTTGCTAGCGTGCCGCCTCAAGGTGGACGCAAACATCCACAACAAGAGATGATTCAAGTGGATACA
AAAAATATCCTCTTCATCGTGGGTGGTGCTTTTGATGGTATTGAAGAAATTGTCAAACAACGTATGGGTGAAAAAGTCAT
CGGATTTGGTCAAAACAATAAGGCGATTGACGAAAACAGCTCATACATGCAAGAAATCATCGCTGAAGACATTCAAAAAT
TTGGTATTATCCCTGAGTTGATTGGACGCTTGCCTGTTTTTGCGGCTCTTGAGCAATTGACTGTTGATGACTTGGTTCGC
ATCTTGAAAGAGCCAAGAAATGCCTTGGTGAAACAATACCAAACCTTGCTTTCTTATGATGATGTTGAGTTGGAATTTGA
CGACGAAGCCCTTCAAGAGATTGCTAATAAAGCAATCGAACGGAAGACAGGGGCGCGTGGACTTCGCTCCATTATCGAAG
AAACCATGCTAGATGTTATGTTTGAGGTGCCGAGTCAGGAAAATGTGAAATTGGTTCGCATCACTAAAGAAACTGTCGAT
GGAACGGATAAACCGATCCTAGAAACAGCCTAG

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (111-306)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (313-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	86.341	100	0.863
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.965	98.049	0.559