Detailed information NTG0201639

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CG712_RS05960
• Genome accession: NZ_CP022547
• Coordinates: 1135362..1136462 (+)
• Length: 366 a.a.
• NCBI ID: WP_096811730.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain B59671
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1130362..1141462

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG712_RS05935 (CG712_05970)	pgsA	1130903..1131445 (-)	543	WP_024704275.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CG712_RS05940 (CG712_05975)	-	1131458..1132315 (-)	858	WP_011681760.1	helix-turn-helix domain-containing protein	-
CG712_RS05945 (CG712_05980)	yfmH	1132374..1133651 (-)	1278	WP_024704276.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
CG712_RS05950 (CG712_05985)	yfmF	1133653..1134903 (-)	1251	WP_024704277.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
CG712_RS05955 (CG712_05990)	yaaA	1134982..1135359 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
CG712_RS05960 (CG712_05995)	recF	1135362..1136462 (+)	1101	WP_096811730.1	DNA replication/repair protein RecF	Machinery gene
CG712_RS05965 (CG712_06000)	guaB	1136631..1138112 (-)	1482	WP_096811732.1	IMP dehydrogenase	-
CG712_RS05970 (CG712_06005)	trpS	1138289..1139311 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
CG712_RS05975 (CG712_06010)	-	1139739..1140611 (+)	873	WP_096811733.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42200.36 Da
• Isoelectric Point: 9.2503

>NTDB_id=201639 CG712_RS05960 WP_096811730.1 1135362..1136462(+) (recF) [Streptococcus thermophilus strain B59671]
MWLKKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLRFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=201639 CG712_RS05960 WP_096811730.1 1135362..1136462(+) (recF) [Streptococcus thermophilus strain B59671]
ATGTGGCTTAAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAT
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGC
AATGCCTATCTCAAGTCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGGCTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCATAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAGATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTGATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACGACAACCTCACTCGATCATCTTAGCAACCTACC
ACCTAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432