Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | BKN48_RS12020 | Genome accession | NZ_CP017676 |
| Coordinates | 2276338..2276736 (-) | Length | 132 a.a. |
| NCBI ID | WP_070548530.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain VV2 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2271338..2281736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKN48_RS11990 (BKN48_11990) | yckA | 2271915..2272595 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| BKN48_RS11995 (BKN48_11995) | yckB | 2272605..2273468 (-) | 864 | WP_080481234.1 | transporter substrate-binding domain-containing protein | - |
| BKN48_RS21215 | - | 2273630..2273827 (+) | 198 | WP_145924794.1 | hypothetical protein | - |
| BKN48_RS12005 (BKN48_12005) | yckC | 2273846..2274301 (+) | 456 | WP_064672016.1 | RDD family protein | - |
| BKN48_RS12010 (BKN48_12010) | yckD | 2274382..2274714 (+) | 333 | WP_015252849.1 | YckD family protein | - |
| BKN48_RS12015 (BKN48_12015) | bglC | 2274868..2276301 (+) | 1434 | WP_070548528.1 | 6-phospho-beta-glucosidase | - |
| BKN48_RS12020 (BKN48_12020) | nin/comJ | 2276338..2276736 (-) | 399 | WP_070548530.1 | DNA-entry nuclease inhibitor | Regulator |
| BKN48_RS12025 (BKN48_12025) | nucA/comI | 2276763..2277212 (-) | 450 | WP_070548532.1 | DNA-entry nuclease | Machinery gene |
| BKN48_RS12030 (BKN48_12030) | tlpC | 2277380..2279101 (-) | 1722 | WP_070548534.1 | methyl-accepting chemotaxis protein TlpC | - |
| BKN48_RS12035 (BKN48_12035) | hxlB | 2279211..2279768 (-) | 558 | WP_041850679.1 | 6-phospho-3-hexuloisomerase | - |
| BKN48_RS12040 (BKN48_12040) | hxlA | 2279774..2280406 (-) | 633 | WP_021481819.1 | 3-hexulose-6-phosphate synthase | - |
| BKN48_RS12045 (BKN48_12045) | hxlR | 2280638..2281000 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14961.94 Da Isoelectric Point: 5.1546
>NTDB_id=201504 BKN48_RS12020 WP_070548530.1 2276338..2276736(-) (nin/comJ) [Bacillus subtilis strain VV2]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSNLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSNLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=201504 BKN48_RS12020 WP_070548530.1 2276338..2276736(-) (nin/comJ) [Bacillus subtilis strain VV2]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAAATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAAATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
98.485 |
100 |
0.985 |