Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BKN48_RS05185 Genome accession   NZ_CP017676
Coordinates   942417..944723 (-) Length   768 a.a.
NCBI ID   WP_070547703.1    Uniprot ID   -
Organism   Bacillus subtilis strain VV2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 937417..949723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS05145 (BKN48_05145) mrpB 937884..938315 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  BKN48_RS05150 (BKN48_05150) mrpC 938315..938656 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  BKN48_RS05155 (BKN48_05155) mrpD 938649..940130 (+) 1482 WP_003228817.1 Na+/H+ antiporter subunit D -
  BKN48_RS05160 (BKN48_05160) mrpE 940136..940612 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  BKN48_RS05165 (BKN48_05165) mrpF 940612..940896 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  BKN48_RS05170 (BKN48_05170) mnhG 940880..941254 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  BKN48_RS05175 (BKN48_05175) yuxO 941293..941673 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  BKN48_RS05180 (BKN48_05180) comA 941692..942336 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  BKN48_RS05185 (BKN48_05185) comP 942417..944723 (-) 2307 WP_070547703.1 two-component system sensor histidine kinase ComP Regulator
  BKN48_RS05190 (BKN48_05190) comX 944740..944913 (-) 174 WP_021480497.1 competence pheromone ComX -
  BKN48_RS05195 (BKN48_05195) comQ 944929..945795 (-) 867 WP_021480498.1 polyprenyl synthetase family protein Regulator
  BKN48_RS05200 (BKN48_05200) degQ 945980..946120 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  BKN48_RS21455 - 946342..946404 (+) 63 Protein_1014 hypothetical protein -
  BKN48_RS05205 (BKN48_05205) - 946582..946950 (+) 369 WP_038828672.1 hypothetical protein -
  BKN48_RS05210 (BKN48_05210) pdeH 946926..948155 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89069.08 Da        Isoelectric Point: 7.9956

>NTDB_id=201482 BKN48_RS05185 WP_070547703.1 942417..944723(-) (comP) [Bacillus subtilis strain VV2]
MKKFSKQITILFIILSIVYVCYINYINLNGIIIGTKVVATENNEYKIVEMTETSYGKFVGLEQGDIIYKINNNKPSKKNL
KGDYLYHIKSLDVMRDGEKIHLKDFDIVNLNGSYSYFLTVLPLVFYFLSLVCIFYVLKVSKIRKSFAGYVLILFLLDVAI
AYMSAGGPARGHGFNRYINLFTFISSPIFYLKFIQEYFKELGKKFANSLVSFLYIIPMLNIGVELFHRHFPQDFITNLNL
VSFFFVTVSGFILVFFHLYKYKYSEHAYILKILILTNTLSFAPFLVFYVVPTILTGEYIFDALSSASLLSLIPFGLVYQF
VANKMFDIEFILGRMRYYALLALIPTLFTVGALALFDSFNIQMSPARQTVFIFIVMFAVFYFKEVIDFKFRLKRFSEKFN
YQDSIFKYTQLMRGVTSLQQVFKELKKTILDVLLVSKAYTFEVTPDHKVIFLDKHEIGPDWHFYQEEFENVTSEIGKIIE
VNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEERMEHLKDLKQEGTNPIWLKKLMF
AIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDL
GLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGV
GFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=201482 BKN48_RS05185 WP_070547703.1 942417..944723(-) (comP) [Bacillus subtilis strain VV2]
TTGAAAAAATTTTCGAAGCAAATTACAATTCTGTTCATTATTTTAAGCATTGTTTATGTTTGCTATATAAATTATATCAA
TTTAAATGGAATTATTATTGGTACTAAGGTCGTTGCAACTGAGAACAATGAATATAAAATTGTTGAAATGACTGAAACCT
CATATGGAAAGTTTGTGGGATTAGAGCAAGGCGATATCATCTATAAAATAAACAATAATAAACCATCAAAAAAGAATCTT
AAAGGGGATTACTTGTATCATATCAAAAGCTTAGATGTAATGAGAGACGGTGAAAAAATACATCTAAAAGATTTTGATAT
AGTTAATTTAAATGGTTCTTATAGTTATTTTCTTACAGTTCTCCCGCTTGTTTTTTATTTTTTAAGTTTAGTTTGCATAT
TTTATGTACTAAAAGTCAGCAAGATAAGGAAATCATTTGCGGGATATGTTTTAATTTTATTCTTATTAGATGTCGCTATT
GCATATATGAGTGCTGGGGGACCAGCCAGAGGACATGGATTTAATAGATATATCAATCTATTTACTTTCATTTCTTCTCC
GATTTTCTACCTGAAATTTATTCAAGAATATTTCAAAGAATTAGGAAAGAAATTTGCAAATTCTTTAGTTTCTTTTCTGT
ACATTATACCAATGCTAAATATTGGGGTTGAGCTTTTTCATCGTCATTTTCCCCAAGATTTTATAACAAACTTAAATCTA
GTATCATTTTTCTTTGTAACCGTATCAGGGTTTATTTTGGTTTTCTTTCATCTGTATAAATATAAATATTCTGAACATGC
TTATATTCTAAAAATATTAATACTAACAAATACTCTTTCTTTTGCGCCTTTTTTAGTTTTTTATGTTGTTCCAACGATTC
TGACGGGTGAATATATATTTGATGCATTATCTTCTGCCTCTTTACTTTCACTCATTCCATTTGGTTTAGTCTATCAATTC
GTTGCGAATAAAATGTTCGATATTGAATTTATATTAGGAAGAATGAGATACTATGCTCTGCTTGCTTTGATACCAACACT
ATTTACTGTTGGAGCATTGGCTTTATTTGATTCGTTTAATATACAAATGAGCCCAGCACGCCAAACTGTATTTATTTTTA
TTGTCATGTTCGCTGTGTTTTATTTTAAAGAGGTCATAGATTTTAAATTTCGGTTAAAACGTTTCTCTGAAAAATTCAAC
TATCAGGACAGTATCTTTAAATATACTCAGTTAATGAGGGGTGTAACTTCTCTTCAACAAGTCTTTAAAGAACTGAAAAA
AACTATTTTGGATGTTTTACTTGTAAGCAAAGCTTATACTTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAGATA
AGCATGAAATTGGACCGGACTGGCATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAAATCATTGAA
GTTAATCAGGGTTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTTTGCTTTGTTTATCTAATATTAACAC
TCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTGTCTTTCTATACAAGTGTGTCCATGGAAAATGTCATGC
ATATTGAGGAACGCATGGAACATTTAAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATGTTT
GCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACG
CCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGA
TGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTT
GGATTGGTGAAGGCGTTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATACCGGAAG
ATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGC
ACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTT
GGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGA
TGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.827


Multiple sequence alignment