Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BKN48_RS01800 | Genome accession | NZ_CP017676 |
| Coordinates | 300973..302010 (-) | Length | 345 a.a. |
| NCBI ID | WP_070547532.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain VV2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 295973..307010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKN48_RS01750 (BKN48_01750) | tasA | 296070..296855 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| BKN48_RS01755 (BKN48_01755) | sipW | 296920..297492 (-) | 573 | WP_080481282.1 | signal peptidase I SipW | - |
| BKN48_RS01760 (BKN48_01760) | tapA | 297476..298237 (-) | 762 | WP_070547528.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BKN48_RS01765 (BKN48_01765) | yqzG | 298508..298834 (+) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| BKN48_RS01770 (BKN48_01770) | spoIITA | 298876..299055 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| BKN48_RS01775 (BKN48_01775) | comGG | 299127..299501 (-) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| BKN48_RS01780 (BKN48_01780) | comGF | 299502..299885 (-) | 384 | WP_070547529.1 | ComG operon protein ComGF | Machinery gene |
| BKN48_RS01785 (BKN48_01785) | comGE | 299911..300258 (-) | 348 | WP_070547530.1 | ComG operon protein 5 | Machinery gene |
| BKN48_RS01790 (BKN48_01790) | comGD | 300242..300673 (-) | 432 | WP_070547531.1 | comG operon protein ComGD | Machinery gene |
| BKN48_RS01795 (BKN48_01795) | comGC | 300663..300959 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| BKN48_RS01800 (BKN48_01800) | comGB | 300973..302010 (-) | 1038 | WP_070547532.1 | comG operon protein ComGB | Machinery gene |
| BKN48_RS01805 (BKN48_01805) | comGA | 301997..303067 (-) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| BKN48_RS21640 (BKN48_01810) | - | 303278..303412 (-) | 135 | WP_257786427.1 | hypothetical protein | - |
| BKN48_RS01815 (BKN48_01815) | corA | 303478..304431 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| BKN48_RS01820 (BKN48_01820) | yqhB | 304574..305902 (+) | 1329 | WP_032726166.1 | hemolysin family protein | - |
| BKN48_RS01825 (BKN48_01825) | rsbRD | 305955..306791 (-) | 837 | WP_070547534.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39682.04 Da Isoelectric Point: 9.6257
>NTDB_id=201466 BKN48_RS01800 WP_070547532.1 300973..302010(-) (comGB) [Bacillus subtilis strain VV2]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSSARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSSARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=201466 BKN48_RS01800 WP_070547532.1 300973..302010(-) (comGB) [Bacillus subtilis strain VV2]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCATCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCATCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.452 |
93.623 |
0.922 |