Detailed information NTG0201466

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CHF17_RS11010
• Genome accession: NZ_CP022537
• Coordinates: 2131086..2132195 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264866.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain 874391
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2126086..2137195

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHF17_RS10985 (CHF17_02163)	-	2126458..2127297 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
CHF17_RS10990 (CHF17_02164)	pgsA	2127297..2127839 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CHF17_RS10995 (CHF17_02165)	-	2127962..2129245 (-)	1284	WP_000217762.1	pitrilysin family protein	-
CHF17_RS11000 (CHF17_02166)	-	2129247..2130491 (-)	1245	WP_000706193.1	pitrilysin family protein	-
CHF17_RS11005 (CHF17_02167)	yaaA	2130730..2131083 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
CHF17_RS11010 (CHF17_02168)	recF	2131086..2132195 (+)	1110	WP_000264866.1	DNA replication/repair protein RecF	Machinery gene
CHF17_RS11015 (CHF17_02169)	-	2132207..2133073 (-)	867	WP_000398683.1	GRP family sugar transporter	-
CHF17_RS11020 (CHF17_02170)	-	2133129..2133791 (-)	663	WP_001869051.1	helix-turn-helix transcriptional regulator	-
CHF17_RS11025 (CHF17_02171)	guaB	2133867..2135348 (-)	1482	WP_000073444.1	IMP dehydrogenase	-
CHF17_RS11030 (CHF17_02172)	-	2135505..2135990 (-)	486	WP_001034427.1	arginine repressor	-
CHF17_RS11035 (CHF17_02173)	-	2136000..2136680 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42502.29 Da
• Isoelectric Point: 7.3132

>NTDB_id=201466 CHF17_RS11010 WP_000264866.1 2131086..2132195(+) (recF) [Streptococcus agalactiae strain 874391]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKSTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=201466 CHF17_RS11010 WP_000264866.1 2131086..2132195(+) (recF) [Streptococcus agalactiae strain 874391]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGTCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444