Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BKM66_RS07040 Genome accession   NZ_CP017666
Coordinates   1433777..1434580 (-) Length   267 a.a.
NCBI ID   WP_044681030.1    Uniprot ID   A0A0Z8P090
Organism   Streptococcus suis strain 0061     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1428777..1439580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM66_RS07025 (BKM66_06850) recR 1429369..1429965 (-) 597 WP_105184260.1 recombination mediator RecR -
  BKM66_RS07030 (BKM66_06855) pbp2b 1429974..1432043 (-) 2070 WP_014637681.1 penicillin-binding protein PBP2B -
  BKM66_RS07035 (BKM66_06860) vga(F) 1432135..1433520 (-) 1386 WP_014637680.1 ABC-F type ribosomal protection protein Vga(F) -
  BKM66_RS07040 (BKM66_06865) vicX 1433777..1434580 (-) 804 WP_044681030.1 MBL fold metallo-hydrolase Regulator
  BKM66_RS07045 (BKM66_06870) micB 1434587..1435936 (-) 1350 WP_002935841.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BKM66_RS07050 (BKM66_06875) micA 1435929..1436633 (-) 705 WP_004298854.1 response regulator YycF Regulator
  BKM66_RS07055 (BKM66_06880) - 1436827..1437588 (+) 762 WP_024399907.1 amino acid ABC transporter ATP-binding protein -
  BKM66_RS07060 (BKM66_06885) - 1437599..1438438 (+) 840 WP_014637678.1 transporter substrate-binding domain-containing protein -
  BKM66_RS07065 (BKM66_06890) - 1438453..1439151 (+) 699 WP_014637677.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29615.68 Da        Isoelectric Point: 5.7755

>NTDB_id=201310 BKM66_RS07040 WP_044681030.1 1433777..1434580(-) (vicX) [Streptococcus suis strain 0061]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVILTDTGYVSDRMVGIV
ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATALTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=201310 BKM66_RS07040 WP_044681030.1 1433777..1434580(-) (vicX) [Streptococcus suis strain 0061]
ATGATCGGAAAAGGTTTTAATTATAGTATTTTAGCTTCGGGGTCCAGCGGGAATTGTTTTTACTTGGAAACAGATAAAAA
GAAAATCTTAGTGGATGCTGGCTTATCAGGGAAAAAGATTACCAGTCTTTTGGCGGAAATTGACCGAAAGCCTGAGGATA
TTGATGCTATCCTGGTAACGCATGAACATAGTGATCACATCCATGGTATCGGTGTTTTAGCACGTAAGTATGGGATGGAC
ATTTATGCCAATGAATTGACCTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTCGA
ATTGGGTGCTATGAAGACTTTTGGCGACCTAGACATTGAGTCCTTTGGAGTTAGTCACGATGCTGCATGTCCGCAATTTT
ACCGTTTTATGAAGGATGACAAATCCTTTGTTATATTGACGGATACAGGCTATGTCAGTGACCGCATGGTTGGAATTGTA
GAAAATGCCGATGCTTATTTGATTGAATCGAACCATGATATTGAAATTTTGCGCTCGGGTTCTTATTCATGGAATTTGAA
GCAACGGATTCTATCCGATAAGGGCCATCTTTGTAACGAAGATGGAGCTGATGCCATGATTCGCTCGCTTGGAAATCGGA
CCAAAAAGATTTACCTAGGTCATTTGTCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAGTTG
GCGCAGGCTGATTTAGGAGTTGGAGTAGATTTCCAAGTCTATGATACATCGCCAGATACAGCGACTGCCTTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z8P090

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.154

100

0.772

Multiple sequence alignment