Detailed information NTG0201152

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: CEK59_RS26280
• Genome accession: NZ_CP022478
• Coordinates: 5542935..5543960 (+)
• Length: 341 a.a.
• NCBI ID: WP_058159876.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain LW
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5537935..5548960

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEK59_RS26255 (CEK59_26145)	-	5538124..5538441 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
CEK59_RS26260 (CEK59_26150)	trkA	5538590..5539963 (-)	1374	WP_003111375.1	Trk system potassium transporter TrkA	-
CEK59_RS26265 (CEK59_26155)	rsmB	5539990..5541294 (-)	1305	WP_058159872.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
CEK59_RS26270 (CEK59_26160)	fmt	5541291..5542235 (-)	945	WP_058159874.1	methionyl-tRNA formyltransferase	-
CEK59_RS26275 (CEK59_26165)	def	5542290..5542796 (-)	507	WP_003097293.1	peptide deformylase	-
CEK59_RS26280 (CEK59_26170)	tsaP	5542935..5543960 (+)	1026	WP_058159876.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
CEK59_RS26285 (CEK59_26175)	dprA	5544095..5545183 (+)	1089	WP_058159879.1	DNA-processing protein DprA	Machinery gene
CEK59_RS26290 (CEK59_26180)	-	5545224..5545781 (+)	558	WP_003097300.1	Sua5/YciO/YrdC/YwlC family protein	-
CEK59_RS26295 (CEK59_26185)	-	5545791..5546768 (-)	978	WP_058159881.1	NADPH:quinone reductase	-
CEK59_RS26300 (CEK59_26190)	hemF	5546959..5547876 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
CEK59_RS26305 (CEK59_26195)	aroE	5547934..5548758 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37614.06 Da
• Isoelectric Point: 9.3358

>NTDB_id=201152 CEK59_RS26280 WP_058159876.1 5542935..5543960(+) (tsaP) [Pseudomonas aeruginosa strain LW]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLVLTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=201152 CEK59_RS26280 WP_058159876.1 5542935..5543960(+) (tsaP) [Pseudomonas aeruginosa strain LW]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAACCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGTGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGTGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393