Detailed information NTG0201142

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KAB07_RS08440
• Genome accession: NZ_CP017654
• Coordinates: 1765962..1766663 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KAB07
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1760962..1771663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAB07_RS08405 (KAB07_01695)	kdsB	1761485..1762246 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KAB07_RS08410 (KAB07_01696)	-	1762258..1763238 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
KAB07_RS08415 (KAB07_01697)	-	1763250..1763591 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
KAB07_RS08420 (KAB07_01698)	-	1763609..1764382 (+)	774	WP_000497298.1	TatD family hydrolase	-
KAB07_RS08425 (KAB07_01699)	-	1764420..1765028 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KAB07_RS08430 (KAB07_01700)	-	1765038..1765592 (+)	555	WP_000841373.1	type II secretion system protein	-
KAB07_RS08435 (KAB07_01701)	xcpV	1765582..1765962 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
KAB07_RS08440 (KAB07_01702)	xcpW	1765962..1766663 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KAB07_RS08445 (KAB07_01703)	gspK	1766663..1767622 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
KAB07_RS08450 (KAB07_01704)	-	1767853..1768449 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
KAB07_RS08455 (KAB07_01705)	ung	1768500..1769213 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
KAB07_RS08460 (KAB07_01706)	-	1769210..1770334 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KAB07_RS08465 (KAB07_01707)	tadA	1770341..1770844 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
KAB07_RS08470 (KAB07_01708)	-	1770914..1771357 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=201142 KAB07_RS08440 WP_000594589.1 1765962..1766663(+) (xcpW) [Acinetobacter baumannii strain KAB07]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=201142 KAB07_RS08440 WP_000594589.1 1765962..1766663(+) (xcpW) [Acinetobacter baumannii strain KAB07]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996