Detailed information NTG0200745

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CGZ53_RS09375
• Genome accession: NZ_CP022435
• Coordinates: 1849854..1850948 (+)
• Length: 364 a.a.
• NCBI ID: WP_015912145.1
• Uniprot ID: B9DWE6
• Organism: Streptococcus uberis strain NZ01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1844854..1855948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGZ53_RS09350 (CGZ53_09345)	pgsA	1844913..1845455 (-)	543	WP_015912140.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CGZ53_RS09355 (CGZ53_09350)	-	1845465..1846508 (-)	1044	WP_015912141.1	helix-turn-helix domain-containing protein	-
CGZ53_RS09360 (CGZ53_09355)	yfmH	1846559..1847842 (-)	1284	WP_015912142.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
CGZ53_RS09365 (CGZ53_09360)	yfmF	1847839..1849086 (-)	1248	WP_037593051.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
CGZ53_RS09370 (CGZ53_09365)	yaaA	1849462..1849851 (+)	390	WP_015912144.1	S4 domain-containing protein YaaA	-
CGZ53_RS09375 (CGZ53_09370)	recF	1849854..1850948 (+)	1095	WP_015912145.1	DNA replication/repair protein RecF	Machinery gene
CGZ53_RS09380 (CGZ53_09375)	-	1850960..1851823 (-)	864	WP_015912146.1	GRP family sugar transporter	-
CGZ53_RS09385 (CGZ53_09380)	guaB	1852011..1853492 (-)	1482	WP_015912147.1	IMP dehydrogenase	-
CGZ53_RS09390 (CGZ53_09385)	trpS	1853733..1854755 (-)	1023	WP_015912148.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41665.77 Da
• Isoelectric Point: 8.9968

>NTDB_id=200745 CGZ53_RS09375 WP_015912145.1 1849854..1850948(+) (recF) [Streptococcus uberis strain NZ01]
MWIKELQLRNFRNYGTVDTEFSPGLNVFIGNNAQGKTNFLEAIYFLALTRSHRTRTDKELIQFSKNNLQLIGKLNRISGA
LSLELQLSDKGRITKINALKQARLSDYIGTMMVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLSDLSNYNYVLKQR
NTYLKTISTINSDFLSVLDEQLADYGSKVIKHRIDFIGELTREANKHHEAISNGLESLIITYESSVTQQDHQTIKEAFLL
NLQKNRQRDIFKKNTSIGPHRDDIHFFINDMNANFASQGQHRSLILSLKMAEVSLMKEMTGDNPILLLDDVMSELDNTRQ
IKLLETVINENVQTFITTTSLDHLLHLPDKIKTFHVNQGTLKAD

Nucleotide

• Length: 1095 bp

>NTDB_id=200745 CGZ53_RS09375 WP_015912145.1 1849854..1850948(+) (recF) [Streptococcus uberis strain NZ01]
ATGTGGATTAAAGAACTTCAACTTAGAAATTTTCGCAATTATGGTACAGTTGATACTGAATTTTCTCCAGGATTAAATGT
TTTCATTGGAAATAACGCCCAAGGGAAAACCAATTTTCTTGAGGCTATCTATTTTTTAGCACTTACACGAAGTCACAGAA
CAAGAACTGATAAAGAACTAATTCAATTTTCCAAAAATAATTTACAGTTAATTGGCAAATTGAACCGAATCAGTGGAGCT
TTAAGTTTAGAATTACAATTATCTGACAAAGGTCGTATAACAAAAATAAATGCCTTAAAACAAGCTCGACTTTCTGATTA
TATTGGAACGATGATGGTTGTTCTCTTTGCACCAGAAGATTTACAACTTATCAAAGGTGCTCCTAGTCTAAGACGAAAGT
TTATTGATATAGATTTAGGTCAAATAAAACCCATTTATTTATCAGATTTATCCAACTATAACTATGTTTTAAAGCAACGT
AATACTTATTTAAAAACAATCTCAACTATCAATTCTGACTTTTTATCTGTATTGGATGAACAATTAGCCGATTATGGAAG
CAAAGTTATTAAACATCGAATAGATTTTATTGGAGAGCTCACCCGTGAAGCTAATAAACATCATGAAGCAATCTCAAATG
GACTTGAATCTTTAATAATCACTTATGAATCTTCAGTCACTCAACAAGATCATCAAACCATTAAAGAAGCCTTTCTACTG
AATCTTCAAAAAAATAGACAAAGAGATATATTTAAAAAGAACACTAGTATTGGACCTCATCGTGATGATATTCACTTTTT
TATCAATGACATGAATGCCAATTTTGCTAGTCAAGGCCAACATAGAAGTCTTATTCTTTCATTAAAAATGGCTGAAGTTA
GTTTGATGAAAGAAATGACTGGAGATAATCCTATATTATTGCTTGATGATGTTATGAGTGAACTAGATAATACCAGACAA
ATAAAATTACTTGAAACTGTCATAAATGAAAATGTTCAAACCTTTATTACGACAACAAGTTTAGATCACCTTCTTCATCT
GCCAGATAAAATTAAAACTTTTCACGTCAATCAGGGCACATTAAAAGCAGACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: B9DWE6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.231	98.626	0.624
recF	Bacillus subtilis subsp. subtilis str. 168	43.343	96.978	0.42