Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   B2G65_RS02450 Genome accession   NZ_CP022354
Coordinates   449467..450501 (+) Length   344 a.a.
NCBI ID   WP_020837588.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain GUR     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 444467..455501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2G65_RS02420 (B2G65_02420) tsaE 445541..446002 (+) 462 WP_023609939.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  B2G65_RS02425 (B2G65_02425) - 445977..446501 (+) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  B2G65_RS02430 (B2G65_02430) brpA 446510..447784 (+) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  B2G65_RS02435 (B2G65_02435) - 447895..448251 (-) 357 WP_002988657.1 hypothetical protein -
  B2G65_RS02440 (B2G65_02440) - 448248..448667 (-) 420 WP_038432458.1 HIT family protein -
  B2G65_RS02445 (B2G65_02445) pptA 448739..449464 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  B2G65_RS02450 (B2G65_02450) pptB 449467..450501 (+) 1035 WP_020837588.1 ABC transporter permease Regulator
  B2G65_RS02455 (B2G65_02455) ccrZ 450565..451356 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  B2G65_RS02460 (B2G65_02460) trmB 451356..451991 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  B2G65_RS02470 (B2G65_02470) rimP 452250..452786 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  B2G65_RS02475 (B2G65_02475) nusA 452961..454118 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  B2G65_RS02480 (B2G65_02480) rnpM 454134..454430 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  B2G65_RS02485 (B2G65_02485) - 454423..454725 (+) 303 WP_011285079.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40260.49 Da        Isoelectric Point: 10.3713

>NTDB_id=200387 B2G65_RS02450 WP_020837588.1 449467..450501(+) (pptB) [Streptococcus pyogenes strain GUR]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFVLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=200387 B2G65_RS02450 WP_020837588.1 449467..450501(+) (pptB) [Streptococcus pyogenes strain GUR]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTGTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment