Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BJG89_RS04725 | Genome accession | NZ_CP017466 |
| Coordinates | 1036050..1036469 (+) | Length | 139 a.a. |
| NCBI ID | WP_096808794.1 | Uniprot ID | A0A291JIA4 |
| Organism | Staphylococcus nepalensis strain JS11 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1031050..1041469
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJG89_RS04700 (BJG89_04630) | - | 1032257..1032661 (+) | 405 | WP_096808789.1 | F0F1 ATP synthase subunit epsilon | - |
| BJG89_RS04705 (BJG89_04635) | - | 1033054..1033287 (+) | 234 | WP_096808790.1 | DUF1146 family protein | - |
| BJG89_RS04710 (BJG89_04640) | murA | 1033387..1034652 (+) | 1266 | WP_096808791.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| BJG89_RS04715 (BJG89_04645) | fabZ | 1034710..1035150 (+) | 441 | WP_096808792.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| BJG89_RS04720 (BJG89_04650) | - | 1035420..1035860 (-) | 441 | WP_096808793.1 | YwpF-like family protein | - |
| BJG89_RS04725 (BJG89_04655) | ssb | 1036050..1036469 (+) | 420 | WP_096808794.1 | single-stranded DNA-binding protein | Machinery gene |
| BJG89_RS04730 (BJG89_04660) | - | 1036890..1037579 (+) | 690 | WP_096808795.1 | transglycosylase family protein | - |
| BJG89_RS04735 (BJG89_04665) | tenA | 1038043..1038723 (+) | 681 | WP_096808796.1 | thiaminase II | - |
| BJG89_RS04740 (BJG89_04670) | thiD | 1038725..1039546 (+) | 822 | WP_096808797.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BJG89_RS04745 (BJG89_04675) | thiM | 1039539..1040324 (+) | 786 | WP_096811203.1 | hydroxyethylthiazole kinase | - |
| BJG89_RS04750 (BJG89_04680) | thiE | 1040327..1040965 (+) | 639 | WP_096808798.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16058.42 Da Isoelectric Point: 5.8068
>NTDB_id=198549 BJG89_RS04725 WP_096808794.1 1036050..1036469(+) (ssb) [Staphylococcus nepalensis strain JS11]
MINSIVIVGRLTKDPKIYEKEGNKRATFCVAVSRNYKDKNQNIVCDYLFCKAFGKMANNVEKYISQGSLVGITGQMQSRK
FEKEGQMHFVSELFIETIQFMSPRIKKEAEAFFEPPTIETNEPSISEFHLEENDIYEIV
MINSIVIVGRLTKDPKIYEKEGNKRATFCVAVSRNYKDKNQNIVCDYLFCKAFGKMANNVEKYISQGSLVGITGQMQSRK
FEKEGQMHFVSELFIETIQFMSPRIKKEAEAFFEPPTIETNEPSISEFHLEENDIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=198549 BJG89_RS04725 WP_096808794.1 1036050..1036469(+) (ssb) [Staphylococcus nepalensis strain JS11]
ATGATTAATAGCATTGTCATTGTAGGGCGACTAACAAAGGACCCTAAAATATATGAGAAGGAGGGGAATAAACGAGCCAC
ATTTTGTGTAGCTGTATCTAGAAATTATAAGGATAAAAACCAAAATATTGTTTGTGATTATTTATTTTGTAAAGCTTTTG
GAAAAATGGCTAATAATGTTGAAAAATATATCAGCCAAGGTTCACTTGTTGGTATAACAGGACAGATGCAATCACGTAAA
TTTGAAAAAGAAGGACAGATGCACTTTGTATCAGAGCTTTTTATTGAAACCATTCAATTCATGTCCCCACGTATTAAAAA
GGAAGCAGAAGCATTTTTTGAACCACCGACTATAGAAACAAATGAACCATCTATAAGTGAATTCCATTTAGAAGAAAATG
ATATATATGAAATTGTATAA
ATGATTAATAGCATTGTCATTGTAGGGCGACTAACAAAGGACCCTAAAATATATGAGAAGGAGGGGAATAAACGAGCCAC
ATTTTGTGTAGCTGTATCTAGAAATTATAAGGATAAAAACCAAAATATTGTTTGTGATTATTTATTTTGTAAAGCTTTTG
GAAAAATGGCTAATAATGTTGAAAAATATATCAGCCAAGGTTCACTTGTTGGTATAACAGGACAGATGCAATCACGTAAA
TTTGAAAAAGAAGGACAGATGCACTTTGTATCAGAGCTTTTTATTGAAACCATTCAATTCATGTCCCCACGTATTAAAAA
GGAAGCAGAAGCATTTTTTGAACCACCGACTATAGAAACAAATGAACCATCTATAAGTGAATTCCATTTAGAAGAAAATG
ATATATATGAAATTGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
72.115 |
74.82 |
0.54 |
| ssb | Staphylococcus aureus MW2 |
71.154 |
74.82 |
0.532 |