Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   S101392_RS20980 Genome accession   NZ_CP021921
Coordinates   4084734..4085528 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4079734..4090528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS20960 (S101392_04147) - 4080848..4081531 (-) 684 WP_024573086.1 response regulator transcription factor -
  S101392_RS20965 (S101392_04148) - 4081743..4082642 (+) 900 WP_015250814.1 PepSY domain-containing protein -
  S101392_RS20970 (S101392_04149) - 4082803..4083303 (+) 501 WP_088327350.1 PepSY domain-containing protein -
  S101392_RS21590 - 4083300..4083429 (-) 130 Protein_4085 hypothetical protein -
  S101392_RS20975 (S101392_04150) htrA 4083450..4084652 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  S101392_RS20980 (S101392_04151) vicX 4084734..4085528 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  S101392_RS20985 (S101392_04152) walI 4085550..4086392 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  S101392_RS20990 (S101392_04153) walH 4086379..4087746 (-) 1368 WP_069323080.1 WalRK two-component regulatory system regulator WalH -
  S101392_RS20995 (S101392_04154) walK 4087736..4089571 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  S101392_RS21000 (S101392_04155) walR 4089579..4090286 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=198532 S101392_RS20980 WP_003226939.1 4084734..4085528(-) (vicX) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=198532 S101392_RS20980 WP_003226939.1 4084734..4085528(-) (vicX) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53