Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   BJG87_RS01170 Genome accession   NZ_CP017463
Coordinates   261318..262211 (+) Length   297 a.a.
NCBI ID   WP_046466949.1    Uniprot ID   -
Organism   Staphylococcus pasteuri strain JS7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 256318..267211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJG87_RS01145 (BJG87_01130) - 257861..258310 (+) 450 WP_017637238.1 MarR family winged helix-turn-helix transcriptional regulator -
  BJG87_RS01150 (BJG87_01135) - 258544..258645 (+) 102 WP_017637237.1 SE2200 family small protein -
  BJG87_RS01155 (BJG87_01140) - 258737..260191 (-) 1455 WP_029055919.1 alkaline phosphatase -
  BJG87_RS13100 - 260449..260625 (+) 177 WP_182758988.1 hypothetical protein -
  BJG87_RS01165 (BJG87_01145) braR 260647..261312 (+) 666 WP_046466948.1 response regulator transcription factor Regulator
  BJG87_RS01170 (BJG87_01150) braS 261318..262211 (+) 894 WP_046466949.1 sensor histidine kinase Regulator
  BJG87_RS01175 (BJG87_01155) - 262318..263070 (+) 753 WP_017637232.1 ABC transporter ATP-binding protein -
  BJG87_RS01180 (BJG87_01160) - 263076..265082 (+) 2007 WP_096807718.1 FtsX-like permease family protein -
  BJG87_RS01185 (BJG87_01165) - 265205..265999 (+) 795 WP_029055924.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 297 a.a.        Molecular weight: 34343.88 Da        Isoelectric Point: 6.3050

>NTDB_id=198508 BJG87_RS01170 WP_046466949.1 261318..262211(+) (braS) [Staphylococcus pasteuri strain JS7]
MMLPFIKTIKNEIAIVTLILLLFAVIFFVFSLSMSALLLGIAIVLFIMLIYWWISYLGFQKQVNLKHKIEVLEEELFETK
KRQAEYQKDIESYFLTWVHQIKTPITATQLLLERNEHNVVNQVRQEIVQIDNYTSLALSYLKLLNEASDMSISEVKIDEL
IKPLIMKYRVHFIEQNTKIHYQSVDDNVLTDAQWASILIEQLLNNALKYARGKDIWINFNSETKQLHIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHISQHLNLNVEVESKLNSGTQFTIDFPRE

Nucleotide


Download         Length: 894 bp        

>NTDB_id=198508 BJG87_RS01170 WP_046466949.1 261318..262211(+) (braS) [Staphylococcus pasteuri strain JS7]
ATGATGTTACCTTTTATAAAAACAATTAAAAATGAAATTGCAATCGTCACATTAATATTATTATTATTTGCTGTGATCTT
TTTTGTATTTTCACTTTCAATGAGTGCATTGCTGCTTGGTATTGCTATTGTTTTATTTATTATGCTGATTTATTGGTGGA
TTAGTTATTTAGGATTTCAAAAACAAGTTAATCTTAAACATAAAATAGAGGTACTTGAAGAAGAATTATTTGAAACAAAA
AAACGACAAGCTGAATATCAAAAAGATATTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATTACTGC
CACCCAATTATTATTAGAACGTAATGAACATAATGTTGTTAATCAAGTAAGACAAGAAATAGTACAAATAGATAATTATA
CTAGTCTAGCATTAAGTTATTTGAAATTACTTAATGAAGCTTCTGATATGAGTATTTCAGAAGTAAAAATTGACGAGTTA
ATCAAGCCTTTAATTATGAAGTATCGTGTACATTTTATTGAACAAAATACTAAAATCCATTATCAATCAGTTGATGATAA
CGTATTAACCGATGCACAATGGGCATCTATATTAATAGAACAGTTGTTAAATAATGCATTAAAGTATGCACGTGGCAAAG
ATATTTGGATTAACTTTAACTCAGAAACAAAACAATTACATATCAAAGATAATGGTATAGGTATTAGCCAAGCAGATTTA
CCAAAAATCTTTGACAAAGGATATTCTGGATATAATGGGAGTCTTAATGAATCATCTAGTGGTATAGGTTTATTTATTGT
TAAACACATATCTCAACATCTTAATTTAAACGTTGAAGTAGAATCAAAATTAAACAGTGGTACGCAATTTACGATTGATT
TTCCAAGAGAATGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

61.017

99.327

0.606

Multiple sequence alignment