Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BJG87_RS01165 Genome accession   NZ_CP017463
Coordinates   260647..261312 (+) Length   221 a.a.
NCBI ID   WP_046466948.1    Uniprot ID   A0AAW7YMP8
Organism   Staphylococcus pasteuri strain JS7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 255647..266312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJG87_RS01135 (BJG87_01120) - 255756..255968 (+) 213 WP_017637240.1 hypothetical protein -
  BJG87_RS01140 (BJG87_01125) - 256055..257695 (-) 1641 WP_046466947.1 alpha-keto acid decarboxylase family protein -
  BJG87_RS01145 (BJG87_01130) - 257861..258310 (+) 450 WP_017637238.1 MarR family winged helix-turn-helix transcriptional regulator -
  BJG87_RS01150 (BJG87_01135) - 258544..258645 (+) 102 WP_017637237.1 SE2200 family small protein -
  BJG87_RS01155 (BJG87_01140) - 258737..260191 (-) 1455 WP_029055919.1 alkaline phosphatase -
  BJG87_RS13100 - 260449..260625 (+) 177 WP_182758988.1 hypothetical protein -
  BJG87_RS01165 (BJG87_01145) braR 260647..261312 (+) 666 WP_046466948.1 response regulator transcription factor Regulator
  BJG87_RS01170 (BJG87_01150) braS 261318..262211 (+) 894 WP_046466949.1 sensor histidine kinase Regulator
  BJG87_RS01175 (BJG87_01155) - 262318..263070 (+) 753 WP_017637232.1 ABC transporter ATP-binding protein -
  BJG87_RS01180 (BJG87_01160) - 263076..265082 (+) 2007 WP_096807718.1 FtsX-like permease family protein -
  BJG87_RS01185 (BJG87_01165) - 265205..265999 (+) 795 WP_029055924.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25587.63 Da        Isoelectric Point: 4.7451

>NTDB_id=198507 BJG87_RS01165 WP_046466948.1 260647..261312(+) (braR) [Staphylococcus pasteuri strain JS7]
MKIFIVEDDFVIAESLANELKNWNYEVSIAKQFSNILDDFITYQPDIVLLDINLPTLNGFHWCQEIRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNDELTVKGCKLIIDEAKIIYNEEAIQLSLTELQIIK
LLFQNEGKFVKRNALIEKCWESENYIDDNTLAVNMTRLRKKLNQIGLKDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=198507 BJG87_RS01165 WP_046466948.1 260647..261312(+) (braR) [Staphylococcus pasteuri strain JS7]
ATGAAGATTTTTATAGTAGAAGATGATTTTGTCATTGCAGAAAGTTTAGCTAATGAACTTAAAAATTGGAATTATGAGGT
AAGTATAGCTAAACAATTCTCAAATATTTTAGATGACTTCATCACATATCAACCTGACATAGTATTGTTAGATATTAATC
TACCGACATTAAATGGATTTCATTGGTGCCAAGAAATAAGAAAGATTTCTAATGTGCCTATTATATTTATCAGTTCTCGA
ACGGATAATATGGATCAAATTATGGCTATCCAAATGGGTGGCGATGACTTCATAGAAAAGCCATTTAATTTATCATTAAC
GGTTGCTAAAGTTCAAGCATTACTTCGTCGTACCTATGATTTAGCAGTTTCCAATGATGAATTAACTGTCAAAGGTTGTA
AGTTAATTATTGATGAGGCCAAAATTATTTATAACGAAGAAGCAATACAATTATCTTTAACAGAACTTCAAATCATAAAG
TTATTATTCCAAAATGAAGGGAAATTCGTTAAACGCAATGCTTTGATTGAAAAATGTTGGGAATCTGAAAATTATATAGA
TGATAATACATTAGCCGTTAATATGACGCGACTGCGCAAGAAATTAAATCAAATTGGTTTAAAAGACTTTATTGAAACGA
AGAAAAATGTTGGATATAGGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

80.995

100

0.81

Multiple sequence alignment