Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BJD96_RS04365 | Genome accession | NZ_CP017460 |
| Coordinates | 955070..955489 (+) | Length | 139 a.a. |
| NCBI ID | WP_096808794.1 | Uniprot ID | A0A291JIA4 |
| Organism | Staphylococcus nepalensis strain JS1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 950070..960489
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD96_RS04340 (BJD96_04290) | - | 951277..951681 (+) | 405 | WP_096808789.1 | F0F1 ATP synthase subunit epsilon | - |
| BJD96_RS04345 (BJD96_04295) | - | 952074..952307 (+) | 234 | WP_096808790.1 | DUF1146 family protein | - |
| BJD96_RS04350 (BJD96_04300) | murA | 952407..953672 (+) | 1266 | WP_096823770.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| BJD96_RS04355 (BJD96_04305) | fabZ | 953730..954170 (+) | 441 | WP_096808792.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| BJD96_RS04360 (BJD96_04310) | - | 954440..954880 (-) | 441 | WP_096808793.1 | YwpF-like family protein | - |
| BJD96_RS04365 (BJD96_04315) | ssb | 955070..955489 (+) | 420 | WP_096808794.1 | single-stranded DNA-binding protein | Machinery gene |
| BJD96_RS04370 (BJD96_04320) | - | 955910..956599 (+) | 690 | WP_096808795.1 | transglycosylase family protein | - |
| BJD96_RS04375 (BJD96_04325) | tenA | 957063..957743 (+) | 681 | WP_096808796.1 | thiaminase II | - |
| BJD96_RS04380 (BJD96_04330) | thiD | 957745..958566 (+) | 822 | WP_096808797.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BJD96_RS04385 (BJD96_04335) | thiM | 958559..959344 (+) | 786 | WP_096811203.1 | hydroxyethylthiazole kinase | - |
| BJD96_RS04390 (BJD96_04340) | thiE | 959347..959985 (+) | 639 | WP_096808798.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16058.42 Da Isoelectric Point: 5.8068
>NTDB_id=198477 BJD96_RS04365 WP_096808794.1 955070..955489(+) (ssb) [Staphylococcus nepalensis strain JS1]
MINSIVIVGRLTKDPKIYEKEGNKRATFCVAVSRNYKDKNQNIVCDYLFCKAFGKMANNVEKYISQGSLVGITGQMQSRK
FEKEGQMHFVSELFIETIQFMSPRIKKEAEAFFEPPTIETNEPSISEFHLEENDIYEIV
MINSIVIVGRLTKDPKIYEKEGNKRATFCVAVSRNYKDKNQNIVCDYLFCKAFGKMANNVEKYISQGSLVGITGQMQSRK
FEKEGQMHFVSELFIETIQFMSPRIKKEAEAFFEPPTIETNEPSISEFHLEENDIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=198477 BJD96_RS04365 WP_096808794.1 955070..955489(+) (ssb) [Staphylococcus nepalensis strain JS1]
ATGATTAATAGCATTGTCATTGTAGGGCGACTAACAAAGGACCCTAAAATATATGAGAAGGAGGGGAATAAACGAGCCAC
ATTTTGTGTAGCTGTATCTAGAAATTATAAGGATAAAAACCAAAATATTGTTTGTGATTATTTATTTTGTAAAGCTTTTG
GAAAAATGGCTAATAATGTTGAAAAATATATCAGCCAAGGTTCACTTGTTGGTATAACAGGACAGATGCAATCACGTAAA
TTTGAAAAAGAAGGACAGATGCACTTTGTATCAGAGCTTTTTATTGAAACCATTCAATTCATGTCCCCACGTATTAAAAA
GGAAGCAGAAGCATTTTTTGAACCACCGACTATAGAAACAAATGAACCATCTATAAGTGAATTCCATTTAGAAGAAAATG
ATATATATGAAATTGTATAA
ATGATTAATAGCATTGTCATTGTAGGGCGACTAACAAAGGACCCTAAAATATATGAGAAGGAGGGGAATAAACGAGCCAC
ATTTTGTGTAGCTGTATCTAGAAATTATAAGGATAAAAACCAAAATATTGTTTGTGATTATTTATTTTGTAAAGCTTTTG
GAAAAATGGCTAATAATGTTGAAAAATATATCAGCCAAGGTTCACTTGTTGGTATAACAGGACAGATGCAATCACGTAAA
TTTGAAAAAGAAGGACAGATGCACTTTGTATCAGAGCTTTTTATTGAAACCATTCAATTCATGTCCCCACGTATTAAAAA
GGAAGCAGAAGCATTTTTTGAACCACCGACTATAGAAACAAATGAACCATCTATAAGTGAATTCCATTTAGAAGAAAATG
ATATATATGAAATTGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
72.115 |
74.82 |
0.54 |
| ssb | Staphylococcus aureus MW2 |
71.154 |
74.82 |
0.532 |