Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BIZ52_RS09880 | Genome accession | NZ_CP017457 |
| Coordinates | 2214944..2215258 (-) | Length | 104 a.a. |
| NCBI ID | WP_027229196.1 | Uniprot ID | A0A2S6EXS5 |
| Organism | Legionella pneumophila subsp. fraseri strain Detroit-1 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2209944..2220258
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIZ52_RS09855 (BIZ52_09760) | - | 2210353..2210853 (-) | 501 | WP_027229191.1 | hypothetical protein | - |
| BIZ52_RS09860 (BIZ52_09765) | - | 2211345..2212205 (+) | 861 | WP_027229192.1 | polysaccharide deacetylase family protein | - |
| BIZ52_RS09865 (BIZ52_09770) | - | 2212339..2213535 (-) | 1197 | WP_027229193.1 | murein transglycosylase A | - |
| BIZ52_RS09870 (BIZ52_09775) | lpp1976 | 2213645..2214202 (-) | 558 | WP_027229194.1 | hypothetical protein | Machinery gene |
| BIZ52_RS09875 (BIZ52_09780) | lpp1977 | 2214199..2214942 (-) | 744 | WP_027229195.1 | PilW family protein | Machinery gene |
| BIZ52_RS09880 (BIZ52_09785) | lpp1978 | 2214944..2215258 (-) | 315 | WP_027229196.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BIZ52_RS09885 (BIZ52_09790) | hisC | 2215419..2216528 (+) | 1110 | WP_027229197.1 | histidinol-phosphate transaminase | - |
| BIZ52_RS09890 (BIZ52_09795) | - | 2216566..2216907 (+) | 342 | WP_027229198.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BIZ52_RS09895 (BIZ52_09800) | secF | 2217082..2217999 (-) | 918 | WP_027229199.1 | protein translocase subunit SecF | - |
| BIZ52_RS09900 (BIZ52_09805) | secD | 2218012..2219868 (-) | 1857 | WP_027229200.1 | protein translocase subunit SecD | - |
| BIZ52_RS09905 (BIZ52_09810) | yajC | 2219890..2220225 (-) | 336 | WP_027229201.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12391.56 Da Isoelectric Point: 9.5369
>NTDB_id=198379 BIZ52_RS09880 WP_027229196.1 2214944..2215258(-) (lpp1978) [Legionella pneumophila subsp. fraseri strain Detroit-1]
MNKQKGFTLMEILMSLMLMTTVVLMLVEQQLKTRDLINHLIWRIHGSQFLDQVDEALYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKNQSIIRSYDLDVN
MNKQKGFTLMEILMSLMLMTTVVLMLVEQQLKTRDLINHLIWRIHGSQFLDQVDEALYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKNQSIIRSYDLDVN
Nucleotide
Download Length: 315 bp
>NTDB_id=198379 BIZ52_RS09880 WP_027229196.1 2214944..2215258(-) (lpp1978) [Legionella pneumophila subsp. fraseri strain Detroit-1]
ATGAACAAGCAAAAGGGTTTCACCCTAATGGAAATACTTATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATTTAATCAATCATCTTATATGGAGAATTCACGGTTCCCAATTTTTAGATCAAGTAG
ATGAAGCATTATATATCAGTGAGAATAGATTACCTCTGCCACCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAGAAAAACCAGTCAATTATTCGTTCCTATGATCTGGACGTTAATTGA
ATGAACAAGCAAAAGGGTTTCACCCTAATGGAAATACTTATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATTTAATCAATCATCTTATATGGAGAATTCACGGTTCCCAATTTTTAGATCAAGTAG
ATGAAGCATTATATATCAGTGAGAATAGATTACCTCTGCCACCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAGAAAAACCAGTCAATTATTCGTTCCTATGATCTGGACGTTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
90.385 |
100 |
0.904 |
| lpp1978 | Legionella pneumophila str. Paris |
90.385 |
100 |
0.904 |