Detailed information NTG0198045

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: BI282_RS08420
• Genome accession: NZ_CP017428
• Coordinates: 1761872..1762762 (-)
• Length: 296 a.a.
• NCBI ID: WP_060803505.1
• Uniprot ID: -
• Organism: Staphylococcus simulans strain MR3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1756872..1767762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BI282_RS08405 (BI282_08340)	xerC	1757257..1758147 (-)	891	WP_002480690.1	tyrosine recombinase XerC	-
BI282_RS08410 (BI282_08345)	trmFO	1758269..1759576 (-)	1308	WP_002480689.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
BI282_RS08415 (BI282_08350)	topA	1759660..1761729 (-)	2070	WP_105977867.1	type I DNA topoisomerase	-
BI282_RS08420 (BI282_08355)	dprA	1761872..1762762 (-)	891	WP_060803505.1	DNA-processing protein DprA	Machinery gene
BI282_RS08425 (BI282_08360)	sucD	1762983..1763897 (-)	915	WP_023015699.1	succinate--CoA ligase subunit alpha	-
BI282_RS08430 (BI282_08365)	sucC	1763918..1765084 (-)	1167	WP_002480685.1	ADP-forming succinate--CoA ligase subunit beta	-
BI282_RS08435 (BI282_08370)	-	1765313..1766083 (-)	771	WP_105966840.1	ribonuclease HII	-
BI282_RS08440 (BI282_08375)	ylqF	1766083..1766952 (-)	870	WP_023015701.1	ribosome biogenesis GTPase YlqF	-
BI282_RS08445 (BI282_08380)	-	1767098..1767586 (-)	489	WP_105966839.1	GyrI-like domain-containing protein	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 34060.23 Da
• Isoelectric Point: 8.9972

>NTDB_id=198045 BI282_RS08420 WP_060803505.1 1761872..1762762(-) (dprA) [Staphylococcus simulans strain MR3]
MNLKELDLELLRLRYAGYSTKQIYALLIRYPDYFELNLPERMTKLRQFSQSAASKTMLLHYQTYCQIEPNDIYQSLVSRN
IYLISIFHPDYPHLLKHIYAPPLLLFCKGNRTCLKTPHYLSVVGSREATKYTQNVLEYLFKNEALHELVIVSGLAKGGDA
FAHEAALHYNMATIGVLAFGHYHHYPKETRALRKRIEQTGLTLSEYIPTDRPARYKFPERNRIISGLSQGVLITESRERS
GAQITVDLALEQDRNVYVLPGSLFQKLTIGNLKRAQEGAKIVLSAQDIMEDYETLN

Nucleotide

• Length: 891 bp

>NTDB_id=198045 BI282_RS08420 WP_060803505.1 1761872..1762762(-) (dprA) [Staphylococcus simulans strain MR3]
TTGAACCTCAAAGAATTAGATTTAGAACTCCTCAGATTACGCTACGCAGGTTACTCCACAAAGCAAATATACGCACTTTT
AATTAGGTATCCAGACTATTTTGAACTAAATTTACCAGAAAGAATGACAAAACTTCGACAATTTTCACAAAGTGCTGCTT
CTAAAACTATGCTTCTGCATTATCAAACATATTGTCAGATAGAGCCAAATGACATTTATCAATCTTTGGTCTCTCGAAAC
ATCTACTTAATTTCCATTTTTCATCCTGATTATCCTCACTTACTTAAACACATTTATGCACCTCCATTATTATTATTTTG
TAAAGGCAATAGAACTTGCTTAAAAACACCTCACTATTTAAGCGTCGTTGGTTCTAGAGAAGCGACAAAGTATACACAAA
ATGTATTAGAATACCTCTTTAAAAATGAAGCATTACATGAGCTCGTTATCGTTTCAGGTTTAGCTAAAGGCGGAGATGCA
TTTGCACATGAAGCGGCTTTACACTATAATATGGCAACGATTGGCGTTTTAGCATTTGGTCATTATCATCATTATCCTAA
AGAAACGCGTGCATTACGAAAACGAATAGAACAAACAGGTTTAACCCTCTCAGAATATATCCCCACAGATAGACCTGCCA
GATATAAATTTCCGGAACGTAATCGTATCATTAGCGGTTTATCGCAAGGCGTACTGATTACTGAGTCTAGAGAAAGAAGC
GGCGCACAAATCACAGTAGATTTAGCTTTAGAACAAGACAGAAATGTTTATGTGTTGCCAGGTAGCTTATTTCAAAAATT
GACCATTGGAAATTTAAAACGCGCACAAGAAGGCGCGAAAATCGTTTTGAGTGCGCAAGATATTATGGAAGATTATGAAA
CATTAAATTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (79-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Staphylococcus aureus N315	51.568	96.959	0.5
dprA	Staphylococcus aureus MW2	51.568	96.959	0.5
dprA	Legionella pneumophila strain ERS1305867	38.305	99.662	0.382
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	37.457	98.311	0.368
dprA/cilB/dalA	Streptococcus pneumoniae D39	37.457	98.311	0.368
dprA/cilB/dalA	Streptococcus pneumoniae R6	37.457	98.311	0.368
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	37.457	98.311	0.368
dprA/cilB/dalA	Streptococcus mitis SK321	37.113	98.311	0.365
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	36.77	98.311	0.361