Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BI282_RS06650 | Genome accession | NZ_CP017428 |
| Coordinates | 1409950..1410924 (+) | Length | 324 a.a. |
| NCBI ID | WP_105966585.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain MR3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1404950..1415924
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI282_RS06620 (BI282_06585) | - | 1405759..1406301 (+) | 543 | WP_106421013.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| BI282_RS06625 (BI282_06590) | - | 1406314..1407771 (+) | 1458 | WP_103364379.1 | rhomboid family intramembrane serine protease | - |
| BI282_RS06630 (BI282_06595) | - | 1407755..1407955 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| BI282_RS06635 (BI282_06600) | - | 1407955..1408941 (+) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| BI282_RS06640 (BI282_06605) | - | 1408941..1409270 (+) | 330 | WP_105966587.1 | MTH1187 family thiamine-binding protein | - |
| BI282_RS06645 (BI282_06610) | - | 1409270..1409893 (+) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| BI282_RS06650 (BI282_06615) | comGA | 1409950..1410924 (+) | 975 | WP_105966585.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BI282_RS06655 (BI282_06620) | comGB | 1410896..1411969 (+) | 1074 | WP_105977709.1 | competence type IV pilus assembly protein ComGB | - |
| BI282_RS06660 (BI282_06625) | comGC | 1411987..1412316 (+) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BI282_RS06665 (BI282_06630) | - | 1412319..1412672 (+) | 354 | WP_257790907.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| BI282_RS13995 | - | 1412728..1413048 (+) | 321 | WP_103364375.1 | hypothetical protein | - |
| BI282_RS14000 (BI282_06635) | - | 1413101..1413457 (+) | 357 | WP_256324336.1 | competence type IV pilus minor pilin ComGF | - |
| BI282_RS06680 (BI282_06645) | - | 1413622..1414161 (+) | 540 | WP_002481034.1 | shikimate kinase | - |
| BI282_RS06685 (BI282_06650) | gcvT | 1414340..1415434 (+) | 1095 | WP_023015155.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36980.98 Da Isoelectric Point: 7.7580
>NTDB_id=198038 BI282_RS06650 WP_105966585.1 1409950..1410924(+) (comGA) [Staphylococcus simulans strain MR3]
MKRLFEKILIDAIAQRVSDIHFIQIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFLKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIQIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFLKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=198038 BI282_RS06650 WP_105966585.1 1409950..1410924(+) (comGA) [Staphylococcus simulans strain MR3]
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACAAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTTTGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGTTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACAAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTTTGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGTTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.372 |
99.691 |
0.602 |
| comGA | Staphylococcus aureus N315 |
60.372 |
99.691 |
0.602 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
37.931 |
98.457 |
0.373 |