Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   S100333_RS00220 Genome accession   NZ_CP021892
Coordinates   41183..42010 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis subsp. subtilis strain SRCM100333     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36183..47010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100333_RS00195 (S100333_00038) efpO 37246..38688 (+) 1443 WP_088272132.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  S100333_RS00200 (S100333_00039) tmk 38685..39323 (+) 639 WP_003243137.1 dTMP kinase -
  S100333_RS00205 (S100333_00040) darA 39397..39726 (+) 330 WP_088272133.1 cyclic di-AMP receptor DarA -
  S100333_RS00210 (S100333_00041) yaaR 39739..40179 (+) 441 WP_009966249.1 YaaR family protein -
  S100333_RS00215 (S100333_00042) holB 40191..41180 (+) 990 WP_088272134.1 DNA polymerase III subunit delta' -
  S100333_RS00220 (S100333_00043) yaaT 41183..42010 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  S100333_RS00225 (S100333_00044) yabA 42025..42384 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  S100333_RS00230 (S100333_00045) trmNF 42443..43186 (+) 744 WP_041338388.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  S100333_RS00235 (S100333_00046) yazA 43173..43472 (+) 300 WP_069837179.1 GIY-YIG nuclease family protein -
  S100333_RS00240 (S100333_00047) rsmI 43447..44325 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  S100333_RS00250 (S100333_00050) abrB 45663..45953 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=197917 S100333_RS00220 WP_003226767.1 41183..42010(+) (yaaT) [Bacillus subtilis subsp. subtilis strain SRCM100333]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=197917 S100333_RS00220 WP_003226767.1 41183..42010(+) (yaaT) [Bacillus subtilis subsp. subtilis strain SRCM100333]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996