Detailed information NTG0197683

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BB165_RS10465
• Genome accession: NZ_CP021870
• Coordinates: 2029744..2030853 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain SG-M4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2024744..2035853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BB165_RS10440 (BB165_10440)	-	2025116..2025955 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
BB165_RS10445 (BB165_10445)	pgsA	2025955..2026497 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BB165_RS10450 (BB165_10450)	-	2026620..2027903 (-)	1284	WP_000217754.1	pitrilysin family protein	-
BB165_RS10455 (BB165_10455)	-	2027905..2029149 (-)	1245	WP_000706188.1	pitrilysin family protein	-
BB165_RS10460 (BB165_10460)	yaaA	2029388..2029741 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
BB165_RS10465 (BB165_10465)	recF	2029744..2030853 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
BB165_RS10470 (BB165_10470)	-	2030865..2031731 (-)	867	WP_000398683.1	GRP family sugar transporter	-
BB165_RS10475 (BB165_10475)	-	2031787..2032449 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
BB165_RS10480 (BB165_10480)	guaB	2032524..2034005 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
BB165_RS10485 (BB165_10485)	-	2034162..2034647 (-)	486	WP_001034427.1	arginine repressor	-
BB165_RS10490 (BB165_10490)	-	2034657..2035337 (-)	681	WP_088203100.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=197683 BB165_RS10465 WP_000264863.1 2029744..2030853(+) (recF) [Streptococcus agalactiae strain SG-M4]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=197683 BB165_RS10465 WP_000264863.1 2029744..2030853(+) (recF) [Streptococcus agalactiae strain SG-M4]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444