Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | BSBS38_RS18195 | Genome accession | NZ_CP017314 |
| Coordinates | 3424469..3425626 (-) | Length | 385 a.a. |
| NCBI ID | WP_003227983.1 | Uniprot ID | A0A199WDV9 |
| Organism | Bacillus subtilis strain BS38 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3419469..3430626
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSBS38_RS18165 (BSBS38_03659) | yvyF | 3419722..3420141 (-) | 420 | WP_038429728.1 | TIGR03826 family flagellar region protein | - |
| BSBS38_RS18170 (BSBS38_03660) | comFC | 3420214..3420936 (-) | 723 | WP_014481051.1 | comF operon protein ComFC | Machinery gene |
| BSBS38_RS18175 (BSBS38_03661) | comFB | 3420900..3421196 (-) | 297 | WP_003227989.1 | late competence protein ComFB | - |
| BSBS38_RS18180 (BSBS38_03662) | comFA | 3421256..3422647 (-) | 1392 | WP_014481052.1 | ATP-dependent helicase ComFA | Machinery gene |
| BSBS38_RS18185 (BSBS38_03663) | fakBA | 3422754..3423599 (-) | 846 | WP_014481053.1 | DegV family protein | - |
| BSBS38_RS18190 (BSBS38_03664) | degU | 3423697..3424386 (-) | 690 | WP_014481054.1 | two-component system response regulator DegU | Regulator |
| BSBS38_RS18195 (BSBS38_03665) | degS | 3424469..3425626 (-) | 1158 | WP_003227983.1 | two-component sensor histidine kinase DegS | Regulator |
| BSBS38_RS18200 (BSBS38_03666) | - | 3425843..3426496 (+) | 654 | WP_014481055.1 | YigZ family protein | - |
| BSBS38_RS18205 (BSBS38_03667) | - | 3426496..3427478 (+) | 983 | Protein_3525 | LCP family protein | - |
| BSBS38_RS18210 (BSBS38_03668) | - | 3428085..3428549 (+) | 465 | WP_228394534.1 | hypothetical protein | - |
| BSBS38_RS18215 (BSBS38_03669) | - | 3428598..3429053 (+) | 456 | WP_014481057.1 | hypothetical protein | - |
| BSBS38_RS18220 (BSBS38_03670) | - | 3429104..3429556 (+) | 453 | WP_014481058.1 | hypothetical protein | - |
| BSBS38_RS18225 (BSBS38_03671) | - | 3429632..3430411 (+) | 780 | WP_014481059.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 385 a.a. Molecular weight: 44957.76 Da Isoelectric Point: 6.2957
>NTDB_id=197654 BSBS38_RS18195 WP_003227983.1 3424469..3425626(-) (degS) [Bacillus subtilis strain BS38]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL
Nucleotide
Download Length: 1158 bp
>NTDB_id=197654 BSBS38_RS18195 WP_003227983.1 3424469..3425626(-) (degS) [Bacillus subtilis strain BS38]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |