Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   BB165_RS06800 Genome accession   NZ_CP021870
Coordinates   1302883..1303323 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain SG-M4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1297883..1308323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB165_RS06785 (BB165_06785) - 1298541..1299167 (-) 627 WP_000449636.1 GTP pyrophosphokinase -
  BB165_RS06790 (BB165_06790) rcrQ 1299275..1301029 (-) 1755 WP_000851084.1 ABC transporter ATP-binding protein Regulator
  BB165_RS06795 (BB165_06795) rcrP 1301019..1302836 (-) 1818 WP_000481820.1 ABC transporter ATP-binding protein Regulator
  BB165_RS06800 (BB165_06800) rcrR 1302883..1303323 (-) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  BB165_RS06805 (BB165_06805) - 1303593..1305665 (+) 2073 WP_000726911.1 bifunctional metallophosphatase/5'-nucleotidase -
  BB165_RS06810 (BB165_06810) - 1305702..1306112 (-) 411 WP_000594936.1 peptide deformylase -
  BB165_RS06815 (BB165_06815) gdhA 1306182..1307531 (-) 1350 WP_088203065.1 NADP-specific glutamate dehydrogenase -
  BB165_RS06820 (BB165_06820) - 1307699..1308208 (+) 510 WP_088203066.1 DUF308 domain-containing protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=197652 BB165_RS06800 WP_000431168.1 1302883..1303323(-) (rcrR) [Streptococcus agalactiae strain SG-M4]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=197652 BB165_RS06800 WP_000431168.1 1302883..1303323(-) (rcrR) [Streptococcus agalactiae strain SG-M4]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411

Multiple sequence alignment