Detailed information NTG0197477

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BB159_RS10985
• Genome accession: NZ_CP021868
• Coordinates: 2124841..2125950 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain SG-M8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2119841..2130950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BB159_RS10960 (BB159_10960)	-	2120213..2121052 (-)	840	WP_000181758.1	energy-coupling factor ABC transporter ATP-binding protein	-
BB159_RS10965 (BB159_10965)	pgsA	2121052..2121594 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BB159_RS10970 (BB159_10970)	yfmH	2121717..2123000 (-)	1284	WP_000217762.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
BB159_RS10975 (BB159_10975)	yfmF	2123002..2124246 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
BB159_RS10980 (BB159_10980)	yaaA	2124485..2124838 (+)	354	WP_000384869.1	S4 domain-containing protein YaaA	-
BB159_RS10985 (BB159_10985)	recF	2124841..2125950 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
BB159_RS10990 (BB159_10990)	-	2125962..2126828 (-)	867	WP_000398683.1	GRP family sugar transporter	-
BB159_RS10995 (BB159_10995)	-	2126884..2127546 (-)	663	WP_001873330.1	helix-turn-helix domain-containing protein	-
BB159_RS11000 (BB159_11000)	guaB	2127621..2129102 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
BB159_RS11005 (BB159_11005)	-	2129259..2129744 (-)	486	WP_001034427.1	arginine repressor	-
BB159_RS11010 (BB159_11010)	-	2129754..2130434 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=197477 BB159_RS10985 WP_000264870.1 2124841..2125950(+) (recF) [Streptococcus agalactiae strain SG-M8]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=197477 BB159_RS10985 WP_000264870.1 2124841..2125950(+) (recF) [Streptococcus agalactiae strain SG-M8]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447