Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | BB313_RS01335 | Genome accession | NZ_CP021865 |
| Coordinates | 216448..216747 (+) | Length | 99 a.a. |
| NCBI ID | WP_000234804.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain SG-M50 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 211448..221747
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BB313_RS01305 (BB313_01300) | - | 213316..213681 (+) | 366 | WP_000285373.1 | DUF1033 family protein | - |
| BB313_RS01315 (BB313_01310) | comGA | 213854..214825 (+) | 972 | WP_000250805.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BB313_RS01320 (BB313_01315) | comGB | 214719..215762 (+) | 1044 | WP_223295889.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BB313_RS01325 (BB313_01320) | comGC/cglC | 215759..216088 (+) | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BB313_RS01330 (BB313_01325) | comGD | 216063..216476 (+) | 414 | WP_000244261.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BB313_RS01335 (BB313_01330) | comGE | 216448..216747 (+) | 300 | WP_000234804.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BB313_RS01340 (BB313_01335) | comGF | 216701..217162 (+) | 462 | WP_001874812.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BB313_RS01345 (BB313_01340) | comGG | 217140..217511 (+) | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BB313_RS01350 (BB313_01345) | comGH | 217626..218600 (+) | 975 | WP_001008574.1 | class I SAM-dependent methyltransferase | Machinery gene |
| BB313_RS01355 (BB313_01350) | - | 218632..219825 (+) | 1194 | WP_000047534.1 | acetate kinase | - |
| BB313_RS01360 (BB313_01355) | - | 219977..220183 (+) | 207 | WP_000798241.1 | helix-turn-helix transcriptional regulator | - |
| BB313_RS01365 (BB313_01360) | - | 220242..220379 (+) | 138 | WP_001865900.1 | hypothetical protein | - |
| BB313_RS01370 (BB313_01365) | - | 220420..220875 (+) | 456 | WP_000905673.1 | hypothetical protein | - |
| BB313_RS01375 (BB313_01370) | - | 220944..221609 (+) | 666 | WP_000008113.1 | CPBP family intramembrane glutamic endopeptidase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11377.53 Da Isoelectric Point: 10.6093
>NTDB_id=197072 BB313_RS01335 WP_000234804.1 216448..216747(+) (comGE) [Streptococcus agalactiae strain SG-M50]
MVIIVRKKIRAYILLESLVGLAILVTITRLVISEINRQQSHIARRQHEQEVLILARMAVQTDQKILEANGVNIRIEESKN
KIVLFEDNKEILHVSKVKG
MVIIVRKKIRAYILLESLVGLAILVTITRLVISEINRQQSHIARRQHEQEVLILARMAVQTDQKILEANGVNIRIEESKN
KIVLFEDNKEILHVSKVKG
Nucleotide
Download Length: 300 bp
>NTDB_id=197072 BB313_RS01335 WP_000234804.1 216448..216747(+) (comGE) [Streptococcus agalactiae strain SG-M50]
GTGGTAATTATCGTAAGAAAGAAAATTAGAGCCTATATTTTACTGGAAAGCCTAGTGGGATTAGCTATTTTAGTTACTAT
TACAAGATTAGTAATAAGTGAAATAAATCGTCAACAATCCCATATTGCAAGAAGGCAACATGAGCAAGAAGTATTGATAT
TAGCTAGAATGGCTGTGCAAACTGATCAAAAAATATTAGAAGCAAATGGTGTTAATATTCGTATTGAAGAAAGTAAAAAT
AAAATTGTGCTCTTTGAAGATAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAA
GTGGTAATTATCGTAAGAAAGAAAATTAGAGCCTATATTTTACTGGAAAGCCTAGTGGGATTAGCTATTTTAGTTACTAT
TACAAGATTAGTAATAAGTGAAATAAATCGTCAACAATCCCATATTGCAAGAAGGCAACATGAGCAAGAAGTATTGATAT
TAGCTAGAATGGCTGTGCAAACTGATCAAAAAATATTAGAAGCAAATGGTGTTAATATTCGTATTGAAGAAAGTAAAAAT
AAAATTGTGCTCTTTGAAGATAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Streptococcus mutans UA140 |
39.583 |
96.97 |
0.384 |
| comGE | Streptococcus mutans UA159 |
39.583 |
96.97 |
0.384 |