Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   FAM18149p_RS06495 Genome accession   NZ_CP017261
Coordinates   1243149..1244390 (-) Length   413 a.a.
NCBI ID   WP_003602466.1    Uniprot ID   A0A422M4M9
Organism   Lacticaseibacillus paracasei strain FAM18149     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1238149..1249390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAM18149p_RS06490 (FAM18149p_06125) - 1241397..1243124 (-) 1728 WP_016385982.1 proline--tRNA ligase -
  FAM18149p_RS06495 (FAM18149p_06130) eeP 1243149..1244390 (-) 1242 WP_003602466.1 RIP metalloprotease RseP Regulator
  FAM18149p_RS06500 (FAM18149p_06135) - 1244407..1245195 (-) 789 WP_003565800.1 phosphatidate cytidylyltransferase -
  FAM18149p_RS06505 (FAM18149p_06140) - 1245231..1245983 (-) 753 WP_003575287.1 isoprenyl transferase -
  FAM18149p_RS06510 (FAM18149p_06145) frr 1246536..1247093 (-) 558 WP_003565804.1 ribosome recycling factor -
  FAM18149p_RS06515 (FAM18149p_06150) pyrH 1247093..1247812 (-) 720 WP_003602471.1 UMP kinase -
  FAM18149p_RS06520 (FAM18149p_06155) tsf 1248048..1248929 (-) 882 WP_003565808.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 413 a.a.        Molecular weight: 45169.81 Da        Isoelectric Point: 8.6663

>NTDB_id=197061 FAM18149p_RS06495 WP_003602466.1 1243149..1244390(-) (eeP) [Lacticaseibacillus paracasei strain FAM18149]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSLILNDQGKVVRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDETTLQTWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFLLAILAFMIYGLFFGVQVLNTNQIGTVVPGYPAAEAGLKSNATVQTIDGQKMSSFTDL
SKIVSKNAGKSVTFTVKENGKSKNIVIKPNKEGKIGVEAHIDKSPANAIPFGFSQTWNLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGIQGLLFFMGYLSLGLGITNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=197061 FAM18149p_RS06495 WP_003602466.1 1243149..1244390(-) (eeP) [Lacticaseibacillus paracasei strain FAM18149]
ATGACCACTATCATCGCCTTTATCGTTATCTTCTGCATTCTTGTGGTAGTTCACGAGTTTGGCCATTTTTACTTTGCAAA
ACGCAGCGGCATTCTAGTCCGGGAATTTTCGATCGGTATGGGCCCGAAGCTGTGGGCGTCGCACAAGAACAATACGACCT
ACACGCTGCGGTTGCTACCACTTGGCGGATACGTCCGCATGGCTGGCTGGCAAGATGAGGAGGACGAGATTAAGCCCGGG
ACGATGCTGAGCCTGATTCTTAACGATCAAGGCAAGGTTGTCCGGATCAATGCCAGTGACAAAACGACTTTGGCCGGTGG
GATGCCGGTTCAAGTGAGCCGCGTCGATTTGGTCAAAGATCTGGTGATTGAAGGTTATCCGAACGGGGACGAAACAACCT
TGCAAACTTGGCAGGTTGACCACGATGCGACGATCATTGAAGAAGACGGAACCGAGGTTCAGATCGCGCCAGAAGACGTT
CAGTTTCAAAACGCCCCGGTTTGGCGCCGGTTATTGGTCAACTTCGCCGGTCCGATGAATAACTTCTTACTCGCGATTCT
AGCTTTTATGATTTACGGTCTGTTTTTTGGTGTTCAGGTGCTCAATACCAACCAAATCGGAACAGTTGTGCCAGGTTATC
CAGCCGCAGAAGCTGGTCTTAAGTCCAATGCGACGGTGCAAACGATTGACGGTCAAAAAATGTCATCATTCACGGATCTT
TCAAAGATCGTCAGTAAAAATGCCGGTAAATCAGTGACATTTACCGTGAAGGAAAACGGTAAAAGCAAGAACATCGTGAT
CAAGCCAAATAAAGAAGGCAAGATCGGGGTTGAAGCACACATCGATAAGTCCCCAGCAAACGCCATTCCTTTTGGCTTTT
CTCAAACTTGGAATTTGGCTGTCCGCACTTGGGACGTGCTCAAATCCATGGTGACCGGCGGTTTTTCACTCAATAAACTG
GCTGGCCCGGTTGGTATTTATACCATGACGAGTCAAAGTGCCAAAGGGGGTATTCAAGGCTTGCTATTCTTTATGGGTTA
CTTGAGTCTCGGCTTAGGGATTACCAATTTGTTGCCGATTCCAGTGCTTGATGGTGGTAAAATTCTTTTGAACCTGATCG
AAATTATTCGCCGTAAGCCATTAAAACCGGAAACGGAAGGCGTTGTGACCATGATTGGCTTGGGCCTGATGGTTCTATTA
ATGCTAGCGGTCACAATCAACGATATCATGCGCTACTTTTAA

Domains


Predicted by InterproScan.

(206-257)

(6-400)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A422M4M9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.057

100

0.504

  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501


Multiple sequence alignment