Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   BFO62_RS11050 Genome accession   NZ_CP017257
Coordinates   1916952..1917647 (-) Length   231 a.a.
NCBI ID   WP_002215704.1    Uniprot ID   Q7DDR6
Organism   Neisseria meningitidis strain COL-201504-11     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1911952..1922647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFO62_RS11040 (BFO62_09965) - 1914224..1915030 (-) 807 WP_076612651.1 inner membrane protein YpjD -
  BFO62_RS11045 (BFO62_09970) ffh 1915251..1916621 (+) 1371 WP_076612650.1 signal recognition particle protein -
  BFO62_RS11050 (BFO62_09975) dsbA2 1916952..1917647 (-) 696 WP_002215704.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  BFO62_RS11055 (BFO62_09980) - 1917818..1918477 (-) 660 WP_002218694.1 NYN domain-containing protein -
  BFO62_RS11060 (BFO62_09985) - 1918680..1920791 (-) 2112 WP_002221449.1 TonB-dependent receptor -
  BFO62_RS11065 (BFO62_09990) - 1920977..1921582 (-) 606 WP_002218691.1 nitroreductase family protein -
  BFO62_RS11070 (BFO62_09995) - 1921631..1922029 (-) 399 WP_002216361.1 DoxX family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25419.90 Da        Isoelectric Point: 5.1502

>NTDB_id=197018 BFO62_RS11050 WP_002215704.1 1916952..1917647(-) (dsbA2) [Neisseria meningitidis strain COL-201504-11]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=197018 BFO62_RS11050 WP_002215704.1 1916952..1917647(-) (dsbA2) [Neisseria meningitidis strain COL-201504-11]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCTGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterProScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

100

100

1

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment