Detailed information NTG0196897

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BL1202_RS19970
• Genome accession: NZ_CP017247
• Coordinates: 3823148..3823882 (-)
• Length: 244 a.a.
• NCBI ID: WP_059260889.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain BL1202
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3818148..3828882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL1202_RS19935 (BL1202_04085)	fliW	3818299..3818730 (-)	432	WP_025807162.1	flagellar assembly protein FliW	-
BL1202_RS19940 (BL1202_04086)	-	3818752..3819318 (-)	567	WP_003185702.1	DUF6470 family protein	-
BL1202_RS19945 (BL1202_04087)	flgL	3819368..3820279 (-)	912	WP_003185705.1	flagellar hook-associated protein FlgL	-
BL1202_RS19950 (BL1202_04088)	flgK	3820290..3821813 (-)	1524	WP_003185709.1	flagellar hook-associated protein FlgK	-
BL1202_RS19955 (BL1202_04089)	-	3821829..3822305 (-)	477	WP_003185711.1	flagellar protein FlgN	-
BL1202_RS19960 (BL1202_04090)	flgM	3822324..3822590 (-)	267	WP_003185713.1	flagellar biosynthesis anti-sigma factor FlgM	-
BL1202_RS19965 (BL1202_04091)	-	3822670..3823089 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
BL1202_RS19970	comFC	3823148..3823882 (-)	735	WP_059260889.1	amidophosphoribosyltransferase	Machinery gene
BL1202_RS19975 (BL1202_04092)	-	3823839..3824123 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
BL1202_RS19980 (BL1202_04093)	comFA	3824178..3825572 (-)	1395	WP_069500926.1	DEAD/DEAH box helicase	Machinery gene
BL1202_RS19985 (BL1202_04094)	-	3825695..3826537 (-)	843	WP_003185726.1	DegV family protein	-
BL1202_RS19990 (BL1202_04095)	degU	3826657..3827346 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
BL1202_RS19995 (BL1202_04096)	degS	3827428..3828585 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 27854.24 Da
• Isoelectric Point: 9.6519

>NTDB_id=196897 BL1202_RS19970 WP_059260889.1 3823148..3823882(-) (comFC) [Bacillus licheniformis strain BL1202]
MKTRFAQAIEEGGNKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQRPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide

• Length: 735 bp

>NTDB_id=196897 BL1202_RS19970 WP_059260889.1 3823148..3823882(-) (comFC) [Bacillus licheniformis strain BL1202]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTCTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAAGACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACAACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (153-242)

• Double zinc ribbon domain (DZR_2) (17-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	52.743	97.131	0.512