Detailed information NTG0196836

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BB161_RS11450
• Genome accession: NZ_CP021862
• Coordinates: 2185397..2186506 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain CUGBS591
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2180397..2191506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BB161_RS11425 (BB161_11410)	-	2180769..2181608 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
BB161_RS11430 (BB161_11415)	pgsA	2181608..2182150 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BB161_RS11435 (BB161_11420)	yfmH	2182273..2183556 (-)	1284	WP_000217765.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
BB161_RS11440 (BB161_11425)	yfmF	2183558..2184802 (-)	1245	WP_000706190.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
BB161_RS11445 (BB161_11430)	yaaA	2185041..2185394 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
BB161_RS11450 (BB161_11435)	recF	2185397..2186506 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
BB161_RS11455 (BB161_11440)	-	2186518..2187384 (-)	867	WP_000398683.1	GRP family sugar transporter	-
BB161_RS11460 (BB161_11445)	-	2187440..2188102 (-)	663	WP_001871057.1	helix-turn-helix domain-containing protein	-
BB161_RS11465 (BB161_11450)	guaB	2188177..2189658 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
BB161_RS11470 (BB161_11455)	-	2189815..2190300 (-)	486	WP_001034427.1	arginine repressor	-
BB161_RS11475 (BB161_11460)	-	2190310..2190990 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=196836 BB161_RS11450 WP_000264870.1 2185397..2186506(+) (recF) [Streptococcus agalactiae strain CUGBS591]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=196836 BB161_RS11450 WP_000264870.1 2185397..2186506(+) (recF) [Streptococcus agalactiae strain CUGBS591]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447