Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   BHS00_RS10370 Genome accession   NZ_CP017194
Coordinates   2146002..2147243 (-) Length   413 a.a.
NCBI ID   WP_079504412.1    Uniprot ID   -
Organism   Lactococcus carnosus strain TMW 2.1612     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2141002..2152243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BHS00_RS10350 (BHS00_10320) - 2141022..2142395 (+) 1374 WP_245403164.1 DNA primase family protein -
  BHS00_RS10355 (BHS00_10325) - 2142769..2143080 (+) 312 WP_097025331.1 hypothetical protein -
  BHS00_RS10365 (BHS00_10335) - 2143977..2145830 (-) 1854 WP_097025332.1 proline--tRNA ligase -
  BHS00_RS10370 (BHS00_10340) eeP 2146002..2147243 (-) 1242 WP_079504412.1 RIP metalloprotease RseP Regulator
  BHS00_RS10375 (BHS00_10345) dxr 2147245..2148420 (-) 1176 WP_097025333.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  BHS00_RS10380 (BHS00_10350) - 2148479..2149273 (-) 795 WP_188347883.1 phosphatidate cytidylyltransferase -
  BHS00_RS10385 (BHS00_10355) - 2149270..2150019 (-) 750 WP_079507809.1 isoprenyl transferase -
  BHS00_RS10390 (BHS00_10360) yajC 2150177..2150533 (-) 357 WP_079504406.1 preprotein translocase subunit YajC -
  BHS00_RS10395 (BHS00_10365) - 2150790..2151536 (+) 747 WP_079504404.1 DUF975 family protein -
  BHS00_RS10400 (BHS00_10370) - 2151628..2152173 (-) 546 WP_079504402.1 DNA-3-methyladenine glycosylase I -

Sequence


Protein


Download         Length: 413 a.a.        Molecular weight: 45089.79 Da        Isoelectric Point: 8.3897

>NTDB_id=196553 BHS00_RS10370 WP_079504412.1 2146002..2147243(-) (eeP) [Lactococcus carnosus strain TMW 2.1612]
MIQSIITFIIIFGIIVCVHEYGHLYFAKKSGILVREFSIGMGPKIYAHQAKDGTVYTIRILPLGGYVRMAGWGEDTTEIK
TGAPVSLTLDSDSMLVTRINLSDKVQFEQSLPMLVTAYDFEHALTITGEVNGQVKTYSVDHDATVVEEDGTELRIAPIDV
QYQSASLPGRMMTNFAGPLNNFILGIVACILVAFMQGGVQDLSSNKITVTDKNLPAYQAGLRTGDTVKAINGTEVSDWQS
LSDQIIKSDGKAIKVKTLKDSLVITPKKQEKAYIIGISPNLKTGFFDKVSGGVQKAATYAFTIINALKNLILHPSLNKLG
GPVAMYQMTGQAAREGLTTVIGFMALLSINLGIFNLMPIPALDGGKIVMNIIEAIRRKPMKQEHETIITLVGVGFMVLLM
IAVTWNDILRLFR

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=196553 BHS00_RS10370 WP_079504412.1 2146002..2147243(-) (eeP) [Lactococcus carnosus strain TMW 2.1612]
ATGATTCAAAGTATTATTACATTTATCATCATATTTGGTATCATCGTCTGTGTACATGAGTACGGCCACTTATACTTCGC
CAAAAAATCGGGTATCCTAGTTCGCGAGTTCTCTATTGGGATGGGACCAAAAATCTATGCACACCAAGCCAAAGATGGCA
CCGTCTATACAATCCGTATCTTACCACTAGGTGGCTATGTACGTATGGCTGGCTGGGGTGAGGATACAACTGAGATTAAA
ACGGGAGCGCCTGTCAGCTTAACACTTGATTCTGACAGTATGCTCGTGACACGAATTAATCTGAGTGATAAAGTTCAATT
TGAACAGTCTCTTCCGATGTTAGTGACTGCCTATGACTTTGAGCATGCCTTAACGATTACAGGTGAAGTGAATGGTCAAG
TCAAGACATACTCAGTAGACCATGATGCGACAGTTGTCGAGGAAGATGGGACTGAGCTTCGCATCGCACCGATAGATGTC
CAATACCAAAGTGCTAGTCTTCCTGGTCGGATGATGACCAACTTTGCTGGACCGCTTAATAATTTTATTTTGGGGATCGT
TGCCTGTATTCTAGTAGCCTTCATGCAAGGTGGTGTTCAAGACTTAAGTAGTAACAAAATCACGGTGACTGATAAAAATC
TGCCTGCCTATCAAGCAGGATTACGTACTGGCGATACGGTTAAAGCTATTAATGGTACTGAGGTATCTGATTGGCAAAGT
CTATCTGATCAAATCATCAAATCAGATGGTAAGGCGATTAAAGTCAAGACGCTTAAAGATAGTCTAGTCATTACACCTAA
AAAACAAGAGAAAGCCTATATTATCGGTATTTCGCCTAATCTTAAGACAGGGTTCTTTGATAAGGTGAGTGGTGGTGTTC
AAAAAGCTGCTACTTATGCCTTTACAATCATTAATGCCTTGAAAAACTTGATCCTGCATCCAAGTCTCAATAAACTGGGT
GGTCCTGTTGCCATGTATCAGATGACTGGTCAAGCGGCGCGTGAAGGCTTAACGACAGTTATCGGCTTTATGGCACTCCT
ATCTATCAATCTAGGGATTTTTAACCTGATGCCAATTCCTGCGCTTGATGGTGGCAAAATTGTCATGAATATCATCGAAG
CAATCCGTCGTAAACCAATGAAACAAGAGCATGAGACGATCATTACCCTTGTCGGTGTTGGCTTCATGGTCTTACTAATG
ATCGCTGTTACTTGGAATGATATTTTGCGCTTATTTAGGTAA

Domains


Predicted by InterproScan.

(7-399)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

61.758

100

0.63

  eeP Streptococcus thermophilus LMD-9

61.52

100

0.627


Multiple sequence alignment