Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BFP66_RS10350 Genome accession   NZ_CP017142
Coordinates   2108960..2109724 (+) Length   254 a.a.
NCBI ID   WP_012775418.1    Uniprot ID   A0A0Z9LUD5
Organism   Streptococcus suis strain GZ0565     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2103960..2114724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFP66_RS10335 (BFP66_10335) - 2106342..2107025 (-) 684 WP_024395547.1 YoaK family protein -
  BFP66_RS10340 (BFP66_10340) rlmH 2107050..2107529 (-) 480 WP_015647604.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BFP66_RS10345 (BFP66_10345) htrA 2107703..2108899 (+) 1197 WP_009911075.1 S1C family serine protease Regulator
  BFP66_RS10350 (BFP66_10350) spo0J 2108960..2109724 (+) 765 WP_012775418.1 ParB/RepB/Spo0J family partition protein Regulator
  BFP66_RS10355 (BFP66_10355) dnaA 2109927..2111300 (+) 1374 WP_024395548.1 chromosomal replication initiator protein DnaA -
  BFP66_RS10360 (BFP66_10360) dnaN 2111454..2112590 (+) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  BFP66_RS10365 (BFP66_10365) - 2112682..2113563 (+) 882 WP_063725132.1 diacylglycerol/lipid kinase family protein -
  BFP66_RS10370 (BFP66_10370) - 2113573..2113776 (+) 204 WP_029172631.1 DUF951 domain-containing protein -
  BFP66_RS10375 (BFP66_10375) - 2113880..2114239 (+) 360 WP_063725133.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28966.25 Da        Isoelectric Point: 9.4760

>NTDB_id=195977 BFP66_RS10350 WP_012775418.1 2108960..2109724(+) (spo0J) [Streptococcus suis strain GZ0565]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=195977 BFP66_RS10350 WP_012775418.1 2108960..2109724(+) (spo0J) [Streptococcus suis strain GZ0565]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGAAAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGATCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z9LUD5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547

Multiple sequence alignment