Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LCW_RS03880 Genome accession   NZ_CP017124
Coordinates   742003..743274 (+) Length   423 a.a.
NCBI ID   WP_065825550.1    Uniprot ID   -
Organism   Latilactobacillus curvatus strain WiKim38     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 737003..748274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LCW_RS03865 (LCW_03865) - 737122..739869 (-) 2748 WP_069468093.1 YhgE/Pip domain-containing protein -
  LCW_RS03870 (LCW_03870) - 740183..740935 (+) 753 WP_004265407.1 isoprenyl transferase -
  LCW_RS03875 (LCW_03875) - 740950..741738 (+) 789 WP_004270081.1 phosphatidate cytidylyltransferase -
  LCW_RS03880 (LCW_03880) eeP 742003..743274 (+) 1272 WP_065825550.1 RIP metalloprotease RseP Regulator
  LCW_RS03885 (LCW_03885) - 743300..745021 (+) 1722 WP_039098737.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 46009.68 Da        Isoelectric Point: 9.9212

>NTDB_id=195896 LCW_RS03880 WP_065825550.1 742003..743274(+) (eeP) [Latilactobacillus curvatus strain WiKim38]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSIGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLLLDEQETVQKINTSDKVTTLNGVPFQIAKTDLQKELWIEGYESGDESELKRYSVSHDATIVESDGTEVQIAPVDV
QFQSASLINRMLTNFAGPFNNFILAIVAFALFAFLNGGVPQNKAIVGTVMPNSPAQKAGLKTDDRLVKVAGKKVTTFTDF
SSVIAKYPNKPVNVQVKRAKQTKSLEITPKAVKVEGQKGKVGQIGVTAGLNHSVGAKLKYGFTQSWANATQIFRILGSFL
TGGFSLNKLAGPVGMYSMTTQFASQGFTMLVYFLAFLSVNLGIMNLIPIPALDGGKLVINVIEAIRGKPISPEKEGIVTL
VGVGMMVVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=195896 LCW_RS03880 WP_065825550.1 742003..743274(+) (eeP) [Latilactobacillus curvatus strain WiKim38]
TTGGCGGCGATTATTGCGTTTATTATCATATTTGGCATTTTAGTAGTAGTACATGAATTTGGCCACTTTTACATGGCGAA
ACGTTCTGGTATTTTGGTGCGTGAATTTTCAATTGGCATGGGGCCCAAATTATTTGCAACGCGCAAAAATGGCACGACTT
ATACGATTCGTTGGTTACCACTTGGCGGCTATGTTCGCATGGCGGGGATGGCGGATGATGAATCTGAAATCGAAGCCGGC
ACGCAAGCAACCTTGCTGTTAGACGAACAAGAAACTGTTCAAAAAATTAATACAAGTGACAAAGTAACCACGTTAAACGG
TGTCCCATTTCAAATTGCAAAAACTGACTTGCAAAAAGAATTATGGATTGAAGGCTATGAAAGTGGTGACGAATCCGAAT
TAAAGCGTTATTCGGTCAGTCACGATGCAACGATTGTTGAATCAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTT
CAATTCCAGTCGGCTAGTTTAATCAATCGGATGTTGACCAACTTCGCAGGACCGTTCAACAACTTTATCCTTGCGATTGT
GGCGTTTGCGCTCTTTGCTTTTTTAAACGGTGGCGTCCCACAAAACAAAGCGATTGTTGGCACAGTGATGCCAAACTCGC
CAGCACAAAAAGCCGGGCTTAAAACGGATGACCGGTTAGTGAAAGTTGCTGGCAAAAAAGTCACGACGTTTACTGATTTC
AGCTCGGTGATTGCAAAATATCCGAATAAACCAGTGAATGTCCAGGTTAAACGGGCAAAGCAAACTAAGTCACTCGAAAT
CACACCTAAAGCGGTGAAAGTCGAGGGACAAAAGGGGAAAGTCGGCCAAATTGGTGTGACAGCTGGACTCAACCATAGCG
TGGGGGCTAAGTTGAAATATGGCTTCACCCAATCATGGGCGAATGCGACCCAGATTTTTAGAATTCTCGGGTCATTCTTA
ACGGGTGGTTTTTCACTCAATAAACTAGCCGGACCAGTCGGCATGTATTCAATGACGACGCAATTCGCGAGTCAAGGCTT
TACAATGCTCGTCTACTTCTTAGCGTTCTTATCCGTCAACTTGGGGATTATGAACCTGATTCCAATTCCGGCCCTCGATG
GTGGTAAGCTCGTGATCAACGTGATTGAAGCGATTCGCGGTAAACCCATCTCACCGGAAAAAGAAGGCATTGTCACCCTT
GTCGGGGTCGGCATGATGGTCGTCTTAATGGTCTTGGTCACATGGAACGATATTCAACGCTTTTTCTTTTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-409)

PDZ domain (PDZ_6)

(205-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.14

100

0.489
  eeP Streptococcus thermophilus LMD-9

48.14

100

0.489

Multiple sequence alignment