Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   FORC45_RS04820 Genome accession   NZ_CP017115
Coordinates   956000..956986 (+) Length   328 a.a.
NCBI ID   WP_000959293.1    Uniprot ID   A0A641A950
Organism   Staphylococcus aureus strain FORC_045     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 951000..961986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC45_RS04795 (FORC45_0881) opp4B 951213..952175 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  FORC45_RS04800 (FORC45_0882) opp4C 952187..953068 (+) 882 WP_001180274.1 oligopeptide ABC transporter permease -
  FORC45_RS04805 (FORC45_0883) trpS 953110..954099 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  FORC45_RS04810 (FORC45_0884) spxA 954394..954789 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  FORC45_RS04815 (FORC45_0885) mecA 955160..955879 (+) 720 WP_001217728.1 adaptor protein MecA -
  FORC45_RS04820 (FORC45_0886) coiA 956000..956986 (+) 987 WP_000959293.1 competence protein CoiA Machinery gene
  FORC45_RS04825 (FORC45_0887) pepF 957034..958842 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  FORC45_RS04830 (FORC45_0888) yjbH 959302..960108 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  FORC45_RS04835 (FORC45_0889) - 960131..960496 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  FORC45_RS04840 (FORC45_0890) - 960600..961193 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  FORC45_RS04845 (FORC45_0891) - 961379..961726 (+) 348 WP_001242102.1 hypothetical protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38898.54 Da        Isoelectric Point: 9.7732

>NTDB_id=195781 FORC45_RS04820 WP_000959293.1 956000..956986(+) (coiA) [Staphylococcus aureus strain FORC_045]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGFKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVGLESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=195781 FORC45_RS04820 WP_000959293.1 956000..956986(+) (coiA) [Staphylococcus aureus strain FORC_045]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATTTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGGTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A641A950

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

100

100

1

  coiA Staphylococcus aureus N315

97.561

100

0.976


Multiple sequence alignment