Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   BS16045_RS19870 Genome accession   NZ_CP017112
Coordinates   3805050..3805169 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain BS16045     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3800050..3810169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS16045_RS19845 (BS16045_03932) albG 3800243..3800914 (+) 672 WP_033883384.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  BS16045_RS19850 (BS16045_03933) ywhL 3800920..3802296 (-) 1377 WP_069322964.1 YncE family protein -
  BS16045_RS19855 (BS16045_03934) ywhK 3802336..3803691 (-) 1356 WP_069322965.1 YncE family protein -
  BS16045_RS22895 - 3803688..3803918 (-) 231 WP_024572000.1 hypothetical protein -
  BS16045_RS19865 (BS16045_03935) rapF 3803921..3805066 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  BS16045_RS19870 (BS16045_03936) phrF 3805050..3805169 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  BS16045_RS19875 (BS16045_03937) - 3805423..3805902 (+) 480 WP_015714892.1 hypothetical protein -
  BS16045_RS19880 (BS16045_03938) - 3806051..3806839 (+) 789 WP_015714893.1 membrane protein -
  BS16045_RS19890 (BS16045_03940) - 3807515..3808306 (+) 792 WP_236823989.1 hypothetical protein -
  BS16045_RS19895 (BS16045_03941) - 3808309..3808956 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  BS16045_RS19900 (BS16045_03942) - 3808949..3809509 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=195734 BS16045_RS19870 WP_009968329.1 3805050..3805169(+) (phrF) [Bacillus subtilis strain BS16045]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=195734 BS16045_RS19870 WP_009968329.1 3805050..3805169(+) (phrF) [Bacillus subtilis strain BS16045]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment