Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   A7J08_RS09030 Genome accession   NZ_CP017088
Coordinates   1805217..1806476 (-) Length   419 a.a.
NCBI ID   WP_053866824.1    Uniprot ID   -
Organism   Streptococcus suis strain SRD478     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1800217..1811476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J08_RS09010 (A7J08_08765) dhaL 1801122..1801697 (+) 576 WP_053867373.1 dihydroxyacetone kinase subunit DhaL -
  A7J08_RS09015 (A7J08_08770) dhaM 1801694..1802068 (+) 375 WP_053867374.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  A7J08_RS09020 (A7J08_08775) - 1802078..1802788 (+) 711 WP_014736436.1 MIP/aquaporin family protein -
  A7J08_RS09025 (A7J08_08780) - 1803011..1804873 (-) 1863 WP_053867521.1 proline--tRNA ligase -
  A7J08_RS09030 (A7J08_08785) eeP 1805217..1806476 (-) 1260 WP_053866824.1 RIP metalloprotease RseP Regulator
  A7J08_RS09035 (A7J08_08790) - 1806486..1807292 (-) 807 WP_014638692.1 phosphatidate cytidylyltransferase -
  A7J08_RS09040 (A7J08_08795) - 1807302..1808057 (-) 756 WP_013730586.1 isoprenyl transferase -
  A7J08_RS09045 (A7J08_08800) yajC 1808171..1808494 (-) 324 WP_014638693.1 preprotein translocase subunit YajC -
  A7J08_RS09050 (A7J08_08805) - 1808604..1809896 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44885.12 Da        Isoelectric Point: 5.4378

>NTDB_id=195418 A7J08_RS09030 WP_053866824.1 1805217..1806476(-) (eeP) [Streptococcus suis strain SRD478]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDNTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYRVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFIQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=195418 A7J08_RS09030 WP_053866824.1 1805217..1806476(-) (eeP) [Streptococcus suis strain SRD478]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCGGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAATACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAGGGTTGATCACGACGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATCCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCGGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATCTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGGCCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGTAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654

  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654


Multiple sequence alignment