Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | BGM21_RS11980 | Genome accession | NZ_CP017071 |
| Coordinates | 2399093..2399389 (-) | Length | 98 a.a. |
| NCBI ID | WP_011231915.1 | Uniprot ID | U2X350 |
| Organism | Geobacillus thermoleovorans strain FJAT-2391 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2394093..2404389
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGM21_RS11945 (BGM21_11945) | - | 2394694..2396358 (+) | 1665 | WP_014196337.1 | DEAD/DEAH box helicase | - |
| BGM21_RS11950 (BGM21_11950) | - | 2396345..2397139 (+) | 795 | WP_069304412.1 | YqhG family protein | - |
| BGM21_RS11955 (BGM21_11955) | - | 2397242..2397421 (-) | 180 | WP_011231910.1 | YqzE family protein | - |
| BGM21_RS11960 (BGM21_11960) | comGG | 2397467..2397856 (-) | 390 | WP_021322352.1 | competence type IV pilus minor pilin ComGG | - |
| BGM21_RS11965 (BGM21_11965) | comGF | 2397931..2398377 (-) | 447 | WP_069304413.1 | competence type IV pilus minor pilin ComGF | - |
| BGM21_RS11970 (BGM21_11970) | - | 2398356..2398682 (-) | 327 | WP_011231913.1 | type II secretion system protein | - |
| BGM21_RS11975 (BGM21_11975) | comGD | 2398666..2399103 (-) | 438 | WP_011231914.1 | competence type IV pilus minor pilin ComGD | - |
| BGM21_RS11980 (BGM21_11980) | comGC | 2399093..2399389 (-) | 297 | WP_011231915.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BGM21_RS11985 (BGM21_11985) | comGB | 2399592..2400620 (-) | 1029 | WP_047758066.1 | competence type IV pilus assembly protein ComGB | - |
| BGM21_RS11990 (BGM21_11990) | comGA | 2400617..2401690 (-) | 1074 | WP_021322348.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BGM21_RS11995 (BGM21_11995) | - | 2401883..2402581 (+) | 699 | WP_011231918.1 | helix-turn-helix transcriptional regulator | - |
| BGM21_RS12000 (BGM21_12000) | - | 2402740..2402982 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| BGM21_RS12005 (BGM21_12005) | - | 2403066..2404199 (-) | 1134 | WP_020278526.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10749.59 Da Isoelectric Point: 7.2422
>NTDB_id=195122 BGM21_RS11980 WP_011231915.1 2399093..2399389(-) (comGC) [Geobacillus thermoleovorans strain FJAT-2391]
MNQKGFTLIEMLIVMMVISVLLLIAIPNMTKHNSMINSKGCEAFLNTVQAQVKAYEMEHNKIPTVQELLAGRYIKSDKCP
NGHAIQISANGDVSESGS
MNQKGFTLIEMLIVMMVISVLLLIAIPNMTKHNSMINSKGCEAFLNTVQAQVKAYEMEHNKIPTVQELLAGRYIKSDKCP
NGHAIQISANGDVSESGS
Nucleotide
Download Length: 297 bp
>NTDB_id=195122 BGM21_RS11980 WP_011231915.1 2399093..2399389(-) (comGC) [Geobacillus thermoleovorans strain FJAT-2391]
ATGAATCAAAAGGGATTCACATTGATCGAAATGTTGATCGTTATGATGGTGATTTCTGTCCTGCTGCTGATTGCCATTCC
GAATATGACAAAGCACAACAGCATGATCAATTCGAAAGGATGCGAGGCGTTTTTGAACACCGTGCAAGCGCAGGTGAAAG
CGTATGAGATGGAGCATAACAAAATTCCGACGGTGCAGGAATTGCTCGCTGGCCGCTATATCAAGTCGGACAAATGTCCG
AACGGTCATGCCATCCAAATCAGCGCGAACGGCGATGTGAGTGAAAGTGGCTCGTAA
ATGAATCAAAAGGGATTCACATTGATCGAAATGTTGATCGTTATGATGGTGATTTCTGTCCTGCTGCTGATTGCCATTCC
GAATATGACAAAGCACAACAGCATGATCAATTCGAAAGGATGCGAGGCGTTTTTGAACACCGTGCAAGCGCAGGTGAAAG
CGTATGAGATGGAGCATAACAAAATTCCGACGGTGCAGGAATTGCTCGCTGGCCGCTATATCAAGTCGGACAAATGTCCG
AACGGTCATGCCATCCAAATCAGCGCGAACGGCGATGTGAGTGAAAGTGGCTCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
52.747 |
92.857 |
0.49 |
| comGC | Staphylococcus aureus MW2 |
41.935 |
94.898 |
0.398 |
| comGC | Staphylococcus aureus N315 |
41.935 |
94.898 |
0.398 |