Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BFP67_RS06785 | Genome accession | NZ_CP017069 |
| Coordinates | 1392008..1392982 (+) | Length | 324 a.a. |
| NCBI ID | WP_002491905.1 | Uniprot ID | - |
| Organism | Staphylococcus lugdunensis strain K93G | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1387008..1397982
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFP67_RS06750 (BFP67_04765) | rpmG | 1387432..1387581 (+) | 150 | WP_001830957.1 | 50S ribosomal protein L33 | - |
| BFP67_RS06755 (BFP67_04760) | - | 1387831..1388367 (+) | 537 | WP_002459008.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| BFP67_RS06760 (BFP67_04755) | - | 1388384..1389841 (+) | 1458 | WP_002491909.1 | rhomboid family protein | - |
| BFP67_RS06765 (BFP67_04750) | - | 1389825..1390028 (+) | 204 | WP_002459010.1 | YqgQ family protein | - |
| BFP67_RS06770 (BFP67_04745) | - | 1390025..1391011 (+) | 987 | WP_002491907.1 | ROK family glucokinase | - |
| BFP67_RS06775 (BFP67_04740) | - | 1391011..1391334 (+) | 324 | WP_002459012.1 | MTH1187 family thiamine-binding protein | - |
| BFP67_RS06780 (BFP67_04735) | - | 1391338..1391961 (+) | 624 | WP_002459013.1 | MBL fold metallo-hydrolase | - |
| BFP67_RS06785 (BFP67_04730) | comGA | 1392008..1392982 (+) | 975 | WP_002491905.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BFP67_RS06790 (BFP67_04725) | comGB | 1392954..1394018 (+) | 1065 | WP_002478130.1 | competence type IV pilus assembly protein ComGB | - |
| BFP67_RS06795 (BFP67_04720) | comGC | 1394033..1394347 (+) | 315 | WP_002459016.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BFP67_RS06800 (BFP67_04715) | comGD | 1394280..1394774 (+) | 495 | WP_225306455.1 | competence type IV pilus minor pilin ComGD | - |
| BFP67_RS06805 (BFP67_04710) | - | 1394761..1395054 (+) | 294 | WP_002459018.1 | hypothetical protein | - |
| BFP67_RS06810 (BFP67_04705) | - | 1395116..1395475 (+) | 360 | WP_002459019.1 | competence type IV pilus minor pilin ComGF | - |
| BFP67_RS06820 (BFP67_04695) | - | 1395629..1396147 (+) | 519 | WP_002459021.1 | shikimate kinase | - |
| BFP67_RS06825 (BFP67_04690) | gcvT | 1396317..1397408 (+) | 1092 | WP_037540763.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36993.89 Da Isoelectric Point: 8.2830
>NTDB_id=195087 BFP67_RS06785 WP_002491905.1 1392008..1392982(+) (comGA) [Staphylococcus lugdunensis strain K93G]
MKILFKEIVNKAIQQNASDIHFIPSQTTVIIKFRVNDQLVYYEELNLSIYTKLLTFMKFQAGLDISTHQIAQSGRYTYQY
KQQYYLRISTLPLSLGTESCVIRIVPQYFQQHKTCYQFNDFKQFMNKKQGLLLFSGPTGSGKSTLMYQMVLYAQQELNLN
VITIEDPVEQLISGITQVSVNDKAGINYVSTFKAILRCDPDVILIGEIRNASIAKCVIQASLSGHLVLSTIHANNCKGTL
LRLLEMGISVQEICQSINLISNQRLITTLNQQRALVCEMMINHQIEYFFEHNHTLPKSFHHLSQLIGNMSKEGVICEETA
NKYT
MKILFKEIVNKAIQQNASDIHFIPSQTTVIIKFRVNDQLVYYEELNLSIYTKLLTFMKFQAGLDISTHQIAQSGRYTYQY
KQQYYLRISTLPLSLGTESCVIRIVPQYFQQHKTCYQFNDFKQFMNKKQGLLLFSGPTGSGKSTLMYQMVLYAQQELNLN
VITIEDPVEQLISGITQVSVNDKAGINYVSTFKAILRCDPDVILIGEIRNASIAKCVIQASLSGHLVLSTIHANNCKGTL
LRLLEMGISVQEICQSINLISNQRLITTLNQQRALVCEMMINHQIEYFFEHNHTLPKSFHHLSQLIGNMSKEGVICEETA
NKYT
Nucleotide
Download Length: 975 bp
>NTDB_id=195087 BFP67_RS06785 WP_002491905.1 1392008..1392982(+) (comGA) [Staphylococcus lugdunensis strain K93G]
ATGAAAATATTATTTAAGGAAATTGTTAACAAAGCGATACAACAGAATGCAAGTGATATTCACTTTATTCCAAGTCAAAC
TACTGTCATCATTAAATTTCGTGTTAATGACCAACTTGTATATTATGAAGAATTAAATTTAAGCATCTATACTAAACTGT
TAACGTTTATGAAATTTCAAGCTGGCTTAGATATATCAACACATCAAATCGCCCAAAGTGGAAGATATACCTATCAATAT
AAGCAACAATATTACTTAAGAATCTCAACTTTACCACTATCATTAGGTACAGAAAGTTGCGTCATTCGTATCGTACCACA
ATACTTTCAACAACATAAAACGTGTTACCAATTTAATGATTTCAAACAGTTTATGAATAAAAAGCAAGGATTGTTATTAT
TTAGTGGTCCAACTGGATCTGGTAAAAGTACACTGATGTATCAAATGGTTTTATATGCACAACAAGAGCTTAATTTAAAT
GTTATTACAATTGAAGATCCAGTTGAACAATTGATATCAGGCATTACACAAGTATCTGTAAATGATAAAGCAGGCATTAA
TTATGTATCAACATTTAAAGCTATTCTGCGCTGTGATCCTGATGTTATCTTAATTGGCGAAATTAGAAATGCCAGTATCG
CAAAATGTGTTATTCAGGCAAGTTTAAGTGGCCATTTAGTATTATCTACAATTCACGCAAACAACTGCAAAGGAACTTTA
TTAAGATTATTAGAAATGGGAATTTCAGTTCAAGAAATATGTCAATCAATTAATTTAATCTCTAATCAAAGACTCATTAC
CACCCTAAATCAACAACGAGCATTGGTTTGCGAAATGATGATAAATCATCAAATAGAATACTTTTTTGAACATAATCATA
CCTTGCCTAAATCATTTCATCATTTATCACAGTTAATTGGTAACATGTCAAAAGAAGGGGTCATTTGTGAAGAAACTGCT
AATAAATATACTTAA
ATGAAAATATTATTTAAGGAAATTGTTAACAAAGCGATACAACAGAATGCAAGTGATATTCACTTTATTCCAAGTCAAAC
TACTGTCATCATTAAATTTCGTGTTAATGACCAACTTGTATATTATGAAGAATTAAATTTAAGCATCTATACTAAACTGT
TAACGTTTATGAAATTTCAAGCTGGCTTAGATATATCAACACATCAAATCGCCCAAAGTGGAAGATATACCTATCAATAT
AAGCAACAATATTACTTAAGAATCTCAACTTTACCACTATCATTAGGTACAGAAAGTTGCGTCATTCGTATCGTACCACA
ATACTTTCAACAACATAAAACGTGTTACCAATTTAATGATTTCAAACAGTTTATGAATAAAAAGCAAGGATTGTTATTAT
TTAGTGGTCCAACTGGATCTGGTAAAAGTACACTGATGTATCAAATGGTTTTATATGCACAACAAGAGCTTAATTTAAAT
GTTATTACAATTGAAGATCCAGTTGAACAATTGATATCAGGCATTACACAAGTATCTGTAAATGATAAAGCAGGCATTAA
TTATGTATCAACATTTAAAGCTATTCTGCGCTGTGATCCTGATGTTATCTTAATTGGCGAAATTAGAAATGCCAGTATCG
CAAAATGTGTTATTCAGGCAAGTTTAAGTGGCCATTTAGTATTATCTACAATTCACGCAAACAACTGCAAAGGAACTTTA
TTAAGATTATTAGAAATGGGAATTTCAGTTCAAGAAATATGTCAATCAATTAATTTAATCTCTAATCAAAGACTCATTAC
CACCCTAAATCAACAACGAGCATTGGTTTGCGAAATGATGATAAATCATCAAATAGAATACTTTTTTGAACATAATCATA
CCTTGCCTAAATCATTTCATCATTTATCACAGTTAATTGGTAACATGTCAAAAGAAGGGGTCATTTGTGAAGAAACTGCT
AATAAATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.588 |
99.691 |
0.704 |
| comGA | Staphylococcus aureus N315 |
70.588 |
99.691 |
0.704 |