Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | MTVDSCj16_RS02815 | Genome accession | NZ_CP017033 |
| Coordinates | 501010..501660 (-) | Length | 216 a.a. |
| NCBI ID | WP_002874366.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni subsp. jejuni strain MTVDSCj16 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 489370..519051 | 501010..501660 | within | 0 |
Gene organization within MGE regions
Location: 489370..519051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MTVDSCj16_RS02720 (MTVDSCj16_0539) | - | 489370..490572 (+) | 1203 | WP_002874346.1 | site-specific integrase | - |
| MTVDSCj16_RS02725 (MTVDSCj16_0540) | - | 490569..490739 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| MTVDSCj16_RS02730 (MTVDSCj16_0541) | - | 490732..491274 (-) | 543 | WP_002801905.1 | pentapeptide repeat-containing protein | - |
| MTVDSCj16_RS02735 (MTVDSCj16_0542) | - | 491276..491986 (-) | 711 | WP_052789479.1 | Rha family transcriptional regulator | - |
| MTVDSCj16_RS09885 (MTVDSCj16_0543) | - | 492117..492752 (-) | 636 | WP_224385547.1 | toxin-antitoxin system HicB family antitoxin | - |
| MTVDSCj16_RS02745 (MTVDSCj16_0544) | - | 492763..493602 (-) | 840 | WP_002861640.1 | hypothetical protein | - |
| MTVDSCj16_RS02750 (MTVDSCj16_0545) | - | 493656..494408 (-) | 753 | WP_057980959.1 | site-specific DNA-methyltransferase | - |
| MTVDSCj16_RS02755 | - | 494411..494746 (-) | 336 | WP_002874350.1 | hypothetical protein | - |
| MTVDSCj16_RS02760 (MTVDSCj16_0546) | - | 494749..495189 (-) | 441 | WP_069360507.1 | YopX family protein | - |
| MTVDSCj16_RS02765 (MTVDSCj16_0547) | - | 495170..495448 (-) | 279 | WP_002874351.1 | hypothetical protein | - |
| MTVDSCj16_RS02770 (MTVDSCj16_0548) | - | 495429..496127 (-) | 699 | WP_052773603.1 | hypothetical protein | - |
| MTVDSCj16_RS02775 (MTVDSCj16_0549) | - | 496127..496861 (-) | 735 | WP_002874353.1 | hypothetical protein | - |
| MTVDSCj16_RS02780 (MTVDSCj16_0550) | - | 496863..497717 (-) | 855 | WP_069360508.1 | lambda-exonuclease family protein | - |
| MTVDSCj16_RS02785 (MTVDSCj16_0551) | - | 497719..497946 (-) | 228 | WP_002874355.1 | helix-turn-helix domain-containing protein | - |
| MTVDSCj16_RS02790 (MTVDSCj16_0552) | - | 497937..498194 (-) | 258 | WP_002865124.1 | hypothetical protein | - |
| MTVDSCj16_RS02795 (MTVDSCj16_0553) | - | 498185..498453 (-) | 269 | Protein_532 | hypothetical protein | - |
| MTVDSCj16_RS02800 (MTVDSCj16_0555) | - | 499012..499284 (-) | 273 | WP_002874359.1 | hypothetical protein | - |
| MTVDSCj16_RS02805 (MTVDSCj16_0556) | - | 499428..500159 (+) | 732 | WP_002861653.1 | hypothetical protein | - |
| MTVDSCj16_RS02810 (MTVDSCj16_0557) | - | 500193..501017 (-) | 825 | WP_002874362.1 | hypothetical protein | - |
| MTVDSCj16_RS02815 (MTVDSCj16_0558) | CJE0566 | 501010..501660 (-) | 651 | WP_002874366.1 | DNA/RNA non-specific endonuclease | Regulator |
| MTVDSCj16_RS02820 (MTVDSCj16_0559) | - | 501704..501976 (-) | 273 | WP_002795981.1 | hypothetical protein | - |
| MTVDSCj16_RS02825 (MTVDSCj16_0560) | - | 501957..502853 (-) | 897 | WP_002874367.1 | hypothetical protein | - |
| MTVDSCj16_RS02830 (MTVDSCj16_0561) | - | 502893..503627 (-) | 735 | WP_002874368.1 | S24 family peptidase | - |
| MTVDSCj16_RS10115 | - | 503739..503957 (+) | 219 | WP_002826741.1 | hypothetical protein | - |
| MTVDSCj16_RS02835 (MTVDSCj16_0562) | - | 504119..504484 (-) | 366 | WP_002874369.1 | hypothetical protein | - |
| MTVDSCj16_RS02840 (MTVDSCj16_0563) | - | 504527..505528 (+) | 1002 | WP_052805132.1 | hypothetical protein | - |
| MTVDSCj16_RS02845 (MTVDSCj16_0564) | - | 505539..506195 (+) | 657 | WP_069360509.1 | hypothetical protein | - |
| MTVDSCj16_RS02850 (MTVDSCj16_0565) | - | 506213..506593 (+) | 381 | WP_002896784.1 | hypothetical protein | - |
| MTVDSCj16_RS02855 (MTVDSCj16_0566) | - | 506593..506979 (+) | 387 | WP_069360510.1 | terminase small subunit | - |
| MTVDSCj16_RS02860 (MTVDSCj16_0567) | - | 506976..508268 (+) | 1293 | WP_002874372.1 | hypothetical protein | - |
| MTVDSCj16_RS02865 (MTVDSCj16_0568) | - | 508258..508530 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| MTVDSCj16_RS02870 (MTVDSCj16_0569) | - | 508511..510049 (+) | 1539 | WP_002826750.1 | hypothetical protein | - |
| MTVDSCj16_RS02875 (MTVDSCj16_0570) | - | 510042..510245 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| MTVDSCj16_RS02880 (MTVDSCj16_0571) | - | 510235..510882 (+) | 648 | WP_002874373.1 | hypothetical protein | - |
| MTVDSCj16_RS02885 (MTVDSCj16_0572) | - | 510893..511273 (+) | 381 | WP_069360511.1 | hypothetical protein | - |
| MTVDSCj16_RS02890 (MTVDSCj16_0573) | - | 511533..512744 (+) | 1212 | WP_002801306.1 | hypothetical protein | - |
| MTVDSCj16_RS02895 (MTVDSCj16_0574) | - | 512744..516445 (+) | 3702 | WP_044258275.1 | PBECR2 nuclease fold domain-containing protein | - |
| MTVDSCj16_RS02900 (MTVDSCj16_0575) | - | 516724..517419 (-) | 696 | WP_172670321.1 | hypothetical protein | - |
| MTVDSCj16_RS02905 (MTVDSCj16_0576) | - | 517570..517776 (-) | 207 | WP_002801300.1 | hypothetical protein | - |
| MTVDSCj16_RS02910 (MTVDSCj16_0577) | - | 518017..519051 (+) | 1035 | WP_052805134.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 25465.05 Da Isoelectric Point: 10.0165
>NTDB_id=194700 MTVDSCj16_RS02815 WP_002874366.1 501010..501660(-) (CJE0566) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
MKKLIILPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
MKKLIILPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
Nucleotide
Download Length: 651 bp
>NTDB_id=194700 MTVDSCj16_RS02815 WP_002874366.1 501010..501660(-) (CJE0566) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
ATGAAAAAACTTATAATCTTACCATTGTTATCCACTCTAGCCTTAGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA
ATGAAAAAACTTATAATCTTACCATTGTTATCCACTCTAGCCTTAGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
90.698 |
99.537 |
0.903 |
| CJE1441 | Campylobacter jejuni RM1221 |
90.233 |
99.537 |
0.898 |