Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | MTVDSCj13_RS05550 | Genome accession | NZ_CP017032 |
| Coordinates | 1048354..1048656 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain MTVDSCj13 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1043354..1053656
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MTVDSCj13_RS05525 (MTVDSCj13_1072) | rpsR | 1043719..1043979 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| MTVDSCj13_RS05530 (MTVDSCj13_1073) | lon | 1044039..1046414 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| MTVDSCj13_RS05535 (MTVDSCj13_1074) | - | 1046431..1047078 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| MTVDSCj13_RS05540 (MTVDSCj13_1075) | fliW | 1047237..1047626 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| MTVDSCj13_RS05545 (MTVDSCj13_1076) | proC | 1047626..1048357 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| MTVDSCj13_RS05550 (MTVDSCj13_1077) | ctsT | 1048354..1048656 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| MTVDSCj13_RS05555 (MTVDSCj13_1078) | - | 1048653..1049315 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| MTVDSCj13_RS05560 (MTVDSCj13_1079) | - | 1049312..1049764 (+) | 453 | WP_002874062.1 | hypothetical protein | - |
| MTVDSCj13_RS05565 (MTVDSCj13_1080) | hemD | 1049761..1050390 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| MTVDSCj13_RS05570 (MTVDSCj13_1081) | thiE | 1050368..1051000 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| MTVDSCj13_RS05575 (MTVDSCj13_1082) | thiD | 1050990..1051802 (-) | 813 | WP_032586361.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| MTVDSCj13_RS05580 (MTVDSCj13_1083) | - | 1051799..1052485 (-) | 687 | WP_032586318.1 | endonuclease III domain-containing protein | - |
| MTVDSCj13_RS05585 (MTVDSCj13_1084) | - | 1052482..1053243 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=194678 MTVDSCj13_RS05550 WP_002853046.1 1048354..1048656(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain MTVDSCj13]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=194678 MTVDSCj13_RS05550 WP_002853046.1 1048354..1048656(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain MTVDSCj13]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |