Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   S100141_RS14300 Genome accession   NZ_CP021669
Coordinates   2645400..2646281 (-) Length   293 a.a.
NCBI ID   WP_009329511.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM100141     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2640400..2651281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100141_RS14265 (S100141_02887) - 2640632..2641108 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  S100141_RS14270 (S100141_02888) - 2641108..2641392 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  S100141_RS14275 (S100141_02889) mnhG 2641376..2641750 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  S100141_RS14280 (S100141_02890) - 2641790..2642179 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  S100141_RS14285 (S100141_02891) comA 2642196..2642834 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  S100141_RS14290 (S100141_02892) comP 2642921..2645221 (-) 2301 WP_009329509.1 ATP-binding protein Regulator
  S100141_RS14295 (S100141_02893) comX 2645223..2645396 (-) 174 WP_009329510.1 competence pheromone ComX -
  S100141_RS14300 (S100141_02894) comQ 2645400..2646281 (-) 882 WP_009329511.1 polyprenyl synthetase family protein Regulator
  S100141_RS14305 (S100141_02895) degQ 2646470..2646610 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  S100141_RS14315 (S100141_02897) - 2647096..2647443 (+) 348 WP_009329512.1 hypothetical protein -
  S100141_RS14320 (S100141_02898) - 2647486..2648706 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  S100141_RS14325 (S100141_02899) - 2648885..2650294 (-) 1410 WP_228767691.1 nicotinate phosphoribosyltransferase -
  S100141_RS14330 (S100141_02900) - 2650372..2650923 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33205.04 Da        Isoelectric Point: 4.8239

>NTDB_id=194642 S100141_RS14300 WP_009329511.1 2645400..2646281(-) (comQ) [Bacillus licheniformis strain SRCM100141]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA
MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY
KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGELKKQQLTSFVLKMFGKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=194642 S100141_RS14300 WP_009329511.1 2645400..2646281(-) (comQ) [Bacillus licheniformis strain SRCM100141]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATCGATGCAGGGACAGCATGACGATCTCAGCAACCGCC
CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT
ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATCGAAAATGA
TTATAAAGCACTTTTTTATGATTCCAAAAGCGATATCGCCAAGAAAAAGCGGACGCTTGCGTACTTATATTTGTCAAGAA
AATTTAACCAGCCGTCGATTGATTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT
AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG
AATCGGGGAGCTGGAGTTGGGGGAGCTGAAAAAACAGCAGTTGACTTCGTTTGTATTGAAGATGTTTGGGAAGGAGGATT
AG

Domains


Predicted by InterProScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.172

98.976

0.447


Multiple sequence alignment