Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CC14983A_RS03520 | Genome accession | NZ_CP017025 |
| Coordinates | 704405..704710 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain 14983A | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 699405..709710
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CC14983A_RS03485 (CC14983A_0684) | - | 699820..700581 (+) | 762 | WP_025431509.1 | ATP-binding protein | - |
| CC14983A_RS03490 (CC14983A_0685) | - | 700578..701261 (+) | 684 | WP_002777124.1 | 3-methyladenine DNA glycosylase | - |
| CC14983A_RS03495 (CC14983A_0686) | thiD | 701261..702073 (+) | 813 | WP_057043367.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CC14983A_RS03500 (CC14983A_0687) | thiE | 702063..702695 (+) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| CC14983A_RS03505 (CC14983A_0688) | - | 702673..703302 (+) | 630 | WP_002795166.1 | uroporphyrinogen-III synthase | - |
| CC14983A_RS03510 (CC14983A_0689) | - | 703295..703747 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| CC14983A_RS03515 (CC14983A_0690) | - | 703744..704412 (-) | 669 | WP_002777103.1 | hypothetical protein | - |
| CC14983A_RS03520 (CC14983A_0691) | ctsT | 704405..704710 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| CC14983A_RS03525 (CC14983A_0692) | proC | 704707..705444 (-) | 738 | WP_002787902.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CC14983A_RS03530 (CC14983A_0693) | fliW | 705444..705833 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| CC14983A_RS03535 (CC14983A_0694) | - | 705997..706644 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| CC14983A_RS03540 (CC14983A_0695) | lon | 706660..709035 (+) | 2376 | WP_002777089.1 | endopeptidase La | - |
| CC14983A_RS03545 (CC14983A_0696) | rpsR | 709091..709351 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=194607 CC14983A_RS03520 WP_002777852.1 704405..704710(-) (ctsT) [Campylobacter coli strain 14983A]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=194607 CC14983A_RS03520 WP_002777852.1 704405..704710(-) (ctsT) [Campylobacter coli strain 14983A]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |