Detailed information    

insolico Bioinformatically predicted

Overview


Name   proC   Type   Machinery gene
Locus tag   CC14983A_RS03525 Genome accession   NZ_CP017025
Coordinates   704707..705444 (-) Length   245 a.a.
NCBI ID   WP_002787902.1    Uniprot ID   A0A630BMP3
Organism   Campylobacter coli strain 14983A     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 699707..710444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CC14983A_RS03485 (CC14983A_0684) - 699820..700581 (+) 762 WP_025431509.1 ATP-binding protein -
  CC14983A_RS03490 (CC14983A_0685) - 700578..701261 (+) 684 WP_002777124.1 3-methyladenine DNA glycosylase -
  CC14983A_RS03495 (CC14983A_0686) thiD 701261..702073 (+) 813 WP_057043367.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CC14983A_RS03500 (CC14983A_0687) thiE 702063..702695 (+) 633 WP_002777120.1 thiamine phosphate synthase -
  CC14983A_RS03505 (CC14983A_0688) - 702673..703302 (+) 630 WP_002795166.1 uroporphyrinogen-III synthase -
  CC14983A_RS03510 (CC14983A_0689) - 703295..703747 (-) 453 WP_002777117.1 hypothetical protein -
  CC14983A_RS03515 (CC14983A_0690) - 703744..704412 (-) 669 WP_002777103.1 hypothetical protein -
  CC14983A_RS03520 (CC14983A_0691) ctsT 704405..704710 (-) 306 WP_002777852.1 hypothetical protein Machinery gene
  CC14983A_RS03525 (CC14983A_0692) proC 704707..705444 (-) 738 WP_002787902.1 pyrroline-5-carboxylate reductase Machinery gene
  CC14983A_RS03530 (CC14983A_0693) fliW 705444..705833 (-) 390 WP_002777093.1 flagellar assembly protein FliW -
  CC14983A_RS03535 (CC14983A_0694) - 705997..706644 (+) 648 WP_002777091.1 outer membrane protein assembly factor BamD -
  CC14983A_RS03540 (CC14983A_0695) lon 706660..709035 (+) 2376 WP_002777089.1 endopeptidase La -
  CC14983A_RS03545 (CC14983A_0696) rpsR 709091..709351 (-) 261 WP_002777087.1 30S ribosomal protein S18 -
  CC14983A_RS03550 (CC14983A_0697) - 709362..709910 (-) 549 WP_002777084.1 single-stranded DNA-binding protein -
  CC14983A_RS03555 (CC14983A_0698) rpsF 709919..710296 (-) 378 WP_002777082.1 30S ribosomal protein S6 -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 26783.17 Da        Isoelectric Point: 9.3032

>NTDB_id=194608 CC14983A_RS03525 WP_002787902.1 704707..705444(-) (proC) [Campylobacter coli strain 14983A]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKDLSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide


Download         Length: 738 bp        

>NTDB_id=194608 CC14983A_RS03525 WP_002787902.1 704707..705444(-) (proC) [Campylobacter coli strain 14983A]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGATCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A630BMP3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  proC Campylobacter jejuni subsp. jejuni 81-176

80.417

97.959

0.788


Multiple sequence alignment