Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   BGI23_RS06040 Genome accession   NZ_CP017016
Coordinates   1161941..1162624 (+) Length   227 a.a.
NCBI ID   WP_000350710.1    Uniprot ID   Q81TR3
Organism   Bacillus sp. ABP14     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1156941..1167624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGI23_RS06015 (BGI23_06015) - 1158010..1159656 (+) 1647 WP_070805488.1 peptide ABC transporter substrate-binding protein -
  BGI23_RS06020 (BGI23_06020) - 1159685..1159888 (-) 204 WP_000559976.1 hypothetical protein -
  BGI23_RS06030 (BGI23_06030) spx 1160482..1160877 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  BGI23_RS06035 (BGI23_06035) - 1160927..1161601 (-) 675 WP_000362601.1 TerC family protein -
  BGI23_RS06040 (BGI23_06040) mecA 1161941..1162624 (+) 684 WP_000350710.1 adaptor protein MecA Regulator
  BGI23_RS06045 (BGI23_06045) - 1162697..1164241 (+) 1545 WP_070805490.1 cardiolipin synthase -
  BGI23_RS06050 (BGI23_06050) - 1164322..1165566 (+) 1245 WP_070805491.1 competence protein CoiA -
  BGI23_RS06055 (BGI23_06055) pepF 1165617..1167443 (+) 1827 WP_070805492.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26966.00 Da        Isoelectric Point: 3.9822

>NTDB_id=194484 BGI23_RS06040 WP_000350710.1 1161941..1162624(+) (mecA) [Bacillus sp. ABP14]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=194484 BGI23_RS06040 WP_000350710.1 1161941..1162624(+) (mecA) [Bacillus sp. ABP14]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGTATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAGGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGCATTTTAAG
CATTGTTTTAGAATACGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q81TR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment