Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BGI23_RS05950 Genome accession   NZ_CP017016
Coordinates   1143532..1143708 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus sp. ABP14     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1138532..1148708
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGI23_RS05930 (BGI23_05930) clpC 1138865..1141465 (+) 2601 WP_044792713.1 ATP-dependent chaperone ClpB Regulator
  BGI23_RS05935 (BGI23_05935) - 1141503..1141685 (-) 183 WP_001211115.1 YjzD family protein -
  BGI23_RS05940 (BGI23_05940) - 1141842..1142576 (+) 735 WP_070805482.1 alpha/beta hydrolase -
  BGI23_RS05945 (BGI23_05945) - 1142606..1143478 (+) 873 WP_070805483.1 NAD(P)-dependent oxidoreductase -
  BGI23_RS05950 (BGI23_05950) comZ 1143532..1143708 (+) 177 WP_009879752.1 ComZ family protein Regulator
  BGI23_RS05955 (BGI23_05955) fabH 1144111..1145043 (+) 933 WP_070805484.1 beta-ketoacyl-ACP synthase III -
  BGI23_RS05960 (BGI23_05960) fabF 1145075..1146313 (+) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  BGI23_RS05965 (BGI23_05965) - 1146420..1147208 (+) 789 WP_070805485.1 DUF2268 domain-containing protein -
  BGI23_RS05970 (BGI23_05970) - 1147352..1148098 (+) 747 WP_000966137.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=194481 BGI23_RS05950 WP_009879752.1 1143532..1143708(+) (comZ) [Bacillus sp. ABP14]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=194481 BGI23_RS05950 WP_009879752.1 1143532..1143708(+) (comZ) [Bacillus sp. ABP14]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment