Detailed information NTG0194480

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: BGI23_RS05930
• Genome accession: NZ_CP017016
• Coordinates: 1138865..1141465 (+)
• Length: 866 a.a.
• NCBI ID: WP_044792713.1
• Uniprot ID: -
• Organism: Bacillus sp. ABP14
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1133865..1146465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BGI23_RS05890 (BGI23_05890)	prsA	1134624..1135481 (-)	858	WP_070805480.1	peptidylprolyl isomerase PrsA	-
BGI23_RS05895 (BGI23_05895)	-	1135612..1135743 (-)	132	WP_001120845.1	DUF3941 domain-containing protein	-
BGI23_RS05900 (BGI23_05900)	-	1135844..1136701 (+)	858	WP_000364453.1	YitT family protein	-
BGI23_RS05905 (BGI23_05905)	-	1136727..1136924 (-)	198	WP_000527392.1	DUF3813 domain-containing protein	-
BGI23_RS05910 (BGI23_05910)	-	1136925..1137065 (-)	141	WP_070805481.1	competence protein	-
BGI23_RS05915 (BGI23_05915)	-	1137171..1137980 (-)	810	WP_001041237.1	Cof-type HAD-IIB family hydrolase	-
BGI23_RS05925 (BGI23_05925)	-	1138475..1138654 (+)	180	WP_000531421.1	YjzC family protein	-
BGI23_RS05930 (BGI23_05930)	clpC	1138865..1141465 (+)	2601	WP_044792713.1	ATP-dependent chaperone ClpB	Regulator
BGI23_RS05935 (BGI23_05935)	-	1141503..1141685 (-)	183	WP_001211115.1	YjzD family protein	-
BGI23_RS05940 (BGI23_05940)	-	1141842..1142576 (+)	735	WP_070805482.1	alpha/beta hydrolase	-
BGI23_RS05945 (BGI23_05945)	-	1142606..1143478 (+)	873	WP_070805483.1	NAD(P)-dependent oxidoreductase	-
BGI23_RS05950 (BGI23_05950)	comZ	1143532..1143708 (+)	177	WP_009879752.1	ComZ family protein	Regulator
BGI23_RS05955 (BGI23_05955)	fabH	1144111..1145043 (+)	933	WP_070805484.1	beta-ketoacyl-ACP synthase III	-
BGI23_RS05960 (BGI23_05960)	fabF	1145075..1146313 (+)	1239	WP_000412651.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97452.44 Da
• Isoelectric Point: 5.1572

>NTDB_id=194480 BGI23_RS05930 WP_044792713.1 1138865..1141465(+) (clpC) [Bacillus sp. ABP14]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKEGAENLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLGEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=194480 BGI23_RS05930 WP_044792713.1 1138865..1141465(+) (clpC) [Bacillus sp. ABP14]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCTCAATCTTTAGCGGTATCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA
ACGTCGATATAGAAGCATTAAAAGAAGGCGCCGAAAATTTAATTAAGAAAAAGCCTTCCGTAACGGGGAGCGGTGCAGAA
GCAGGTAAATTATATATAACAGGTGCTTTGCAACAACTGCTTGTAAGAGCAGGAAAAGAAGCAGAGAAATTGCAAGATGA
TTACATTTCAGTTGAACATGTATTACTTGCTTTTACTGAAGAAAAAGGCGATATAAACCAATTATTTACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATCGGCCGCGA
TAGTGAAATTCGCCGCGTAATCCGCATTCTTTCACGTAAAACGAAAAACAACCCAGTTTTAATTGGTGAACCAGGTGTTG
GTAAAACAGCAATTGTTGAAGGGTTAGCACAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTAAAAGATAGAACAATC
TTTGCATTAGATATGAGTGCGCTTGTAGCTGGAGCGAAATTCCGCGGTGAATTTGAAGAGCGTCTCCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGTCGTATTTTACTATTCATTGATGAACTTCACACAATCGTCGGCGCTGGTAAAACAGAAG
GCGCAATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACGACGTTAGAT
GAATATCGTAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCCATTTTACGTGGCTTAAAAGAGCGTTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG
TAGCGGCATCAGTTTTATCAGATCGATATATTTCGGACCGTTTCTTACCGGATAAAGCAATTGATCTTGTCGATGAAGCT
TGTGCAACAATTCGTACAGAAATCGATTCTATGCCGACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCAGCTCTTGGAAAAGAAAAGGACTTTGGTAGCCAAGAACGTCTAAAAACGTTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTGCGTGACTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGGAATTACGATTTAAATAAAGCAGCGGAACTTCGCCACGG
AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCACATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCGCGCTGGACTGGTATTCCTGTTGCAAAACTCGTTGAAGGT
GAACGCGAGAAATTACTACGTTTAGAGCAAATTTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTATC
AGACGCAGTTCTTCGTGCACGCGCAGGTATTAAAGACCCGAACCGTCCGATTGGTTCCTTCATTTTCTTAGGACCGACTG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCATTATTCGATAGTGAAGAACAAATGATTCGTATTGATATG
TCTGAGTATATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCGCCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCGTATTCCGTTATTTTATTAGACGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGACGGTCGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACGGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGGAGAAGATGGCTCCATTAAAGAAGAATCAAGAGA
ACTTGTAATGGGACAATTAAGAGGTCATTTCCGACCAGAGTTTTTAAACCGTGTCGACGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGCCGTTTAGCTGACCGTCATATTACG
GTAGAATTAACAGACGCAGCGAAAGAGTTTGTTGTCGAAGCTGGCTTCGATCCAATGTACGGAGCTCGTCCGTTAAAACG
ATATGTGCAGCGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGAACGATTACTGACAATAGTCATGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAGTAA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (345-447)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.771	100	0.483
clpC	Lactococcus lactis subsp. cremoris KW2	47.339	82.448	0.39