Detailed information
Bioinformatically predicted
Overview
| Name | recU | Type | Machinery gene |
| Locus tag | CCX85_RS06785 | Genome accession | NZ_CP021640 |
| Coordinates | 1339429..1340037 (+) | Length | 202 a.a. |
| NCBI ID | WP_002983622.1 | Uniprot ID | P65998 |
| Organism | Streptococcus pyogenes strain JS12 | ||
| Function | plasmid transformation; homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1334429..1345037
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCX85_RS06755 (CCX85_06760) | - | 1334676..1335158 (+) | 483 | WP_002988938.1 | S-ribosylhomocysteine lyase | - |
| CCX85_RS06760 (CCX85_06765) | - | 1335303..1336772 (-) | 1470 | WP_101248428.1 | cell division site-positioning protein MapZ family protein | - |
| CCX85_RS06765 (CCX85_06770) | - | 1336786..1337940 (-) | 1155 | WP_011888664.1 | THUMP domain-containing class I SAM-dependent RNA methyltransferase | - |
| CCX85_RS06775 (CCX85_06780) | gpsB | 1338385..1338711 (-) | 327 | WP_002983626.1 | cell division regulator GpsB | - |
| CCX85_RS06780 (CCX85_06785) | - | 1338833..1339348 (-) | 516 | WP_011285056.1 | DUF1273 domain-containing protein | - |
| CCX85_RS06785 (CCX85_06790) | recU | 1339429..1340037 (+) | 609 | WP_002983622.1 | Holliday junction resolvase RecU | Machinery gene |
| CCX85_RS06790 (CCX85_06795) | pbp1a | 1340024..1342189 (+) | 2166 | WP_023609908.1 | penicillin-binding protein PBP1A | - |
| CCX85_RS06795 (CCX85_06800) | pepC | 1342656..1343993 (-) | 1338 | WP_101248429.1 | aminopeptidase C | - |
| CCX85_RS06800 (CCX85_06805) | nadE | 1344178..1345002 (-) | 825 | WP_101248430.1 | ammonia-dependent NAD(+) synthetase | - |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23356.93 Da Isoelectric Point: 9.8725
>NTDB_id=194466 CCX85_RS06785 WP_002983622.1 1339429..1340037(+) (recU) [Streptococcus pyogenes strain JS12]
MVNYPHNLIRQKVSSVQKQTKQNKVDFANRGMSFEAAINATNDYYLSRQIAVIHKKPTPVQIVKVDYPKRSRAKIVEAYF
RQASTTDYCGVYKGHYVDFEAKETRQKTAMPMKNFHLHQIEHMACVLHQKGICFVLLHFSTLKETYYLPAQALISFYQID
NGSKSMPIDYIRKNGFKVAFGAFPQVPYLNIIEQNFLGGDYN
MVNYPHNLIRQKVSSVQKQTKQNKVDFANRGMSFEAAINATNDYYLSRQIAVIHKKPTPVQIVKVDYPKRSRAKIVEAYF
RQASTTDYCGVYKGHYVDFEAKETRQKTAMPMKNFHLHQIEHMACVLHQKGICFVLLHFSTLKETYYLPAQALISFYQID
NGSKSMPIDYIRKNGFKVAFGAFPQVPYLNIIEQNFLGGDYN
Nucleotide
Download Length: 609 bp
>NTDB_id=194466 CCX85_RS06785 WP_002983622.1 1339429..1340037(+) (recU) [Streptococcus pyogenes strain JS12]
ATGGTTAATTATCCTCATAATCTTATTCGACAAAAAGTAAGTTCCGTTCAAAAGCAAACAAAGCAAAATAAGGTGGACTT
CGCCAATAGAGGTATGTCCTTTGAAGCTGCTATCAACGCGACAAATGATTATTATTTATCTCGTCAAATAGCTGTCATTC
ACAAAAAACCTACTCCTGTCCAAATTGTCAAAGTGGATTACCCTAAACGCAGTCGGGCAAAAATCGTTGAAGCGTACTTT
AGACAAGCTTCAACGACTGACTATTGCGGCGTTTATAAAGGACATTATGTTGATTTTGAAGCAAAAGAAACCAGGCAAAA
AACAGCTATGCCCATGAAAAATTTCCATTTACATCAGATTGAACATATGGCTTGCGTTTTACATCAAAAAGGAATCTGCT
TTGTCCTTCTTCACTTTTCCACACTGAAGGAGACTTACTACCTACCTGCTCAAGCCTTGATTTCATTTTATCAGATAGAT
AATGGCAGTAAATCGATGCCCATTGATTATATCAGAAAAAATGGCTTTAAGGTAGCATTTGGAGCCTTTCCACAAGTCCC
TTATTTAAACATAATTGAACAAAATTTTTTAGGCGGTGATTACAATTAA
ATGGTTAATTATCCTCATAATCTTATTCGACAAAAAGTAAGTTCCGTTCAAAAGCAAACAAAGCAAAATAAGGTGGACTT
CGCCAATAGAGGTATGTCCTTTGAAGCTGCTATCAACGCGACAAATGATTATTATTTATCTCGTCAAATAGCTGTCATTC
ACAAAAAACCTACTCCTGTCCAAATTGTCAAAGTGGATTACCCTAAACGCAGTCGGGCAAAAATCGTTGAAGCGTACTTT
AGACAAGCTTCAACGACTGACTATTGCGGCGTTTATAAAGGACATTATGTTGATTTTGAAGCAAAAGAAACCAGGCAAAA
AACAGCTATGCCCATGAAAAATTTCCATTTACATCAGATTGAACATATGGCTTGCGTTTTACATCAAAAAGGAATCTGCT
TTGTCCTTCTTCACTTTTCCACACTGAAGGAGACTTACTACCTACCTGCTCAAGCCTTGATTTCATTTTATCAGATAGAT
AATGGCAGTAAATCGATGCCCATTGATTATATCAGAAAAAATGGCTTTAAGGTAGCATTTGGAGCCTTTCCACAAGTCCC
TTATTTAAACATAATTGAACAAAATTTTTTAGGCGGTGATTACAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recU | Bacillus subtilis subsp. subtilis str. 168 |
51.269 |
97.525 |
0.5 |