Detailed information NTG0193637

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: BARD7_RS11405
• Genome accession: NZ_CP016913
• Coordinates: 2330203..2332554 (-)
• Length: 783 a.a.
• NCBI ID: WP_065981915.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain RD7-7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2325203..2337554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BARD7_RS11375 (BARD7_02334)	-	2325565..2325903 (-)	339	WP_045510470.1	YqxA family protein	-
BARD7_RS11380 (BARD7_02335)	spoIIP	2325920..2327113 (-)	1194	WP_045510467.1	stage II sporulation protein P	-
BARD7_RS11385 (BARD7_02336)	gpr	2327181..2328287 (-)	1107	WP_014470697.1	GPR endopeptidase	-
BARD7_RS11390 (BARD7_02337)	rpsT	2328490..2328756 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
BARD7_RS11395 (BARD7_02338)	holA	2328774..2329815 (-)	1042	Protein_2254	DNA polymerase III subunit delta	-
BARD7_RS18985	-	2329855..2330009 (-)	155	Protein_2255	hypothetical protein	-
BARD7_RS11400 (BARD7_02339)	-	2330050..2330184 (+)	135	WP_003152870.1	YqzM family protein	-
BARD7_RS11405 (BARD7_02340)	comEC	2330203..2332554 (-)	2352	WP_065981915.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BARD7_RS11410 (BARD7_02341)	-	2332555..2333124 (-)	570	WP_065981916.1	ComE operon protein 2	-
BARD7_RS11415 (BARD7_02342)	comEA	2333190..2333804 (-)	615	WP_065981917.1	helix-hairpin-helix domain-containing protein	Machinery gene
BARD7_RS11420 (BARD7_02343)	comER	2333864..2334685 (+)	822	WP_065981918.1	late competence protein ComER	-
BARD7_RS11425 (BARD7_02344)	-	2334754..2335491 (-)	738	WP_065981919.1	class I SAM-dependent DNA methyltransferase	-
BARD7_RS11430 (BARD7_02345)	rsfS	2335488..2335844 (-)	357	WP_045510454.1	ribosome silencing factor	-
BARD7_RS11435 (BARD7_02346)	yqeK	2335861..2336421 (-)	561	WP_032856887.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
BARD7_RS11440 (BARD7_02347)	-	2336411..2336980 (-)	570	WP_065981920.1	nicotinate-nucleotide adenylyltransferase	-
BARD7_RS11445 (BARD7_02348)	yhbY	2336991..2337281 (-)	291	WP_014470707.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 87214.05 Da
• Isoelectric Point: 8.6350

>NTDB_id=193637 BARD7_RS11405 WP_065981915.1 2330203..2332554(-) (comEC) [Bacillus amyloliquefaciens strain RD7-7]
MKYKYLLLPLAAVSATAGIAAANSFWILFFFLLYLLFIIVKIKQHTPVIVCLVSFCLYFFIYTACDAANVSRYQAGSYTE
QALIINIPKVDGAKMSAVIRIHDKEKWAASYKIRSLEEKKLIEQLEPGMRCTFTGSLEQPGHATIPGGFDYKEYLYSQHI
HWIFSVTSIKQCEKSEQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLLKRSIHSSAALSMSYLLLLLFDP
YLLWQAGFQLSFAVSAALILSSSILKKAGKNRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPF
SVIGFLLLLFSRQAGEFLFYLFDLVMKPVHDFITYAASVDLFAMIASKPDFLSLLMLAVSVFTLFAALEKEGFLKLRKSA
LFFFAVLAYIMFRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYSEESWKEKHHPYSIGEKVLIPFLNGK
GVEKLDALILTHADQDHIGEAGVLIKKHRVKRLIVPVGFVKEQKDREILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESPDGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSSTSEAFLKQLQPETALISAGK
DNRYHHPHEEVLDRLKAYSVNVLRTDVSGTIQYRFKKGAGTFSVFLPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=193637 BARD7_RS11405 WP_065981915.1 2330203..2332554(-) (comEC) [Bacillus amyloliquefaciens strain RD7-7]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACCGCGGGAATTGCCGCCGCTAATTCCTTCTGGAT
CCTATTCTTTTTCCTTCTGTATCTTCTCTTTATTATCGTAAAAATAAAGCAGCACACACCGGTTATCGTCTGCCTCGTTT
CTTTTTGTCTTTATTTCTTTATTTATACGGCTTGTGACGCTGCGAATGTATCCAGGTATCAGGCCGGCAGCTATACTGAA
CAGGCTCTCATAATAAACATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTATCCATGACAAAGAAAAATG
GGCTGCTTCGTACAAAATCCGGTCCCTTGAAGAAAAAAAACTCATTGAACAGCTGGAACCGGGGATGCGCTGTACGTTTA
CAGGCTCACTGGAACAGCCCGGACATGCGACGATTCCCGGGGGTTTTGATTATAAGGAATATCTTTACTCCCAGCATATT
CACTGGATATTTTCCGTTACTTCCATTAAGCAGTGCGAAAAATCCGAACAGCCGCTGTTTAAGCTTCTGAACATCAGAAA
GAATTTGATTTCGATCATTCGGAATCATGTACCTGAATCTTCCGCGGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGACATACTGAGCGCTTATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCCCTTATCAGAATTGGACTGACAAGAGAAAAGGCGGGGATGTTGCTGCTGCT
TTTTTTGCCGGTGTATACGTTGTTAAGCGGTGCCGCCCCTTCTGTACTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTTTGAAACGCAGCATTCATTCCTCGGCTGCATTGTCCATGTCTTATCTGCTGCTTCTGCTGTTTGATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCGCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAACAGACTCGCAGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGTTCGCTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCGCTCGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGTTT
TCTGTCATCGGGTTCCTTCTTCTCTTATTTTCCAGGCAGGCGGGGGAATTTTTGTTTTACCTGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTGCAATGATTGCGTCAAAGCCTGACTTTCTGTCGC
TTCTTATGCTTGCGGTTTCCGTTTTTACGCTTTTTGCAGCTTTGGAAAAGGAAGGTTTTTTAAAGCTCAGGAAATCGGCT
CTTTTTTTCTTTGCGGTTTTGGCTTATATAATGTTCCGTCCTTATTTCAGTCCTTGGGGAGAAGCGGATATGCTTGATAT
CGGACAGGGAGATTCACTGTTTATAAGTGCCCCGCACCGTAAAGGTACCGTAATGGTTGATACAGGAGGAGTGATTGCTT
ATTCCGAAGAATCGTGGAAAGAAAAACACCACCCGTATTCTATCGGCGAGAAGGTTTTAATTCCGTTTTTGAACGGAAAG
GGGGTGGAGAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAGGATCATATCGGGGAAGCCGGAGTATTAATCAAAAA
ACATAGAGTGAAACGGTTAATTGTCCCCGTGGGATTTGTGAAGGAACAGAAGGATCGGGAAATATTGAATATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAACGGGGCGATACCATAACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGCCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACAGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAGGTGCTGAAAACGTATCCGAATCTGAAGGCCGATATATTGAAGGCCGGTC
ATCACGGCAGCAAAAGCTCTACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAGACAGCGCTGATTTCAGCAGGAAAA
GATAATCGTTATCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAAGCTTACTCTGTCAATGTGCTTCGCACCGACGT
CAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCTGTCTTCCTTCCATATGATATAGAAGAAACCA
GGGCGCAGGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (26-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	55.311	98.595	0.545